Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AL022238.1-201ENST00000442557 355 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 SNORD42A-201ENST00000459584 64 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC104806.1-201ENST00000508720 308 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 Y_RNA.717-201ENST00000517106 92 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 BNIP3P6-201ENST00000549284 499 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC110588.1-201ENST00000559699 137 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC007229.1-201ENST00000590455 412 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC073539.2-201ENST00000597113 165 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AL031274.2-201ENST00000599419 203 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 MIR6715A-201ENST00000615929 79 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC026585.1-201ENST00000619582 524 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 Y_RNA.40-201ENST00000362645 93 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 MIR504-201ENST00000385065 83 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 SNORA26.8-201ENST00000391306 124 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 HMGN2P39-201ENST00000398005 273 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 OR6C66P-201ENST00000414917 930 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 C1DP2-201ENST00000418167 426 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 snoU13.14-201ENST00000459372 104 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AL121594.1-201ENST00000475906 575 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 RPL21P99-201ENST00000480369 423 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 MTCO3P9-201ENST00000506989 781 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 MTND3P25-201ENST00000509243 135 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC060788.1-201ENST00000521318 469 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC107953.1-201ENST00000522216 297 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 OR5AL2P-201ENST00000532185 920 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 NDUFA5P6-201ENST00000542110 379 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC104984.5-201ENST00000586878 94 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC078899.2-201ENST00000595282 212 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 ELOCP5-201ENST00000604924 333 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 RMST_7.1-201ENST00000621935 268 ntBASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM40Q6P9F5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 FGF7P2-201ENST00000332473 296 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-655P-201ENST00000362858 107 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-108P-201ENST00000365558 107 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-116P-201ENST00000384042 109 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-297P-201ENST00000384636 107 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU2-3P-201ENST00000410144 191 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RNU6-607P-201ENST00000411283 108 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 OR9R1P-201ENST00000412200 877 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RPL31P35-201ENST00000431058 377 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 SNRPGP9-201ENST00000456025 225 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC137800.2-201ENST00000574375 120 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 MIR98-201ENST00000606724 119 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 AC011155.2-201ENST00000623202 216 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 U6.114-201ENST00000636407 96 ntBASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.74□□□□□ -2.13
TRIM40Q6P9F5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC002543.1-201ENST00000299783 1954 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNU6-212P-201ENST00000362642 104 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNU6-78P-201ENST00000362897 107 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 SNORA62.1-201ENST00000364287 154 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNU4-91P-201ENST00000364778 135 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNU6-74P-201ENST00000384235 107 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNY3P10-201ENST00000384764 102 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNU6-550P-201ENST00000391057 101 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 MTND2P18-201ENST00000419962 1030 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 FDX1P2-201ENST00000450769 375 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 RNA5SP269-201ENST00000459032 137 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 MTCYBP40-201ENST00000509390 1135 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 SNORD27.1-201ENST00000516319 72 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC145350.1-201ENST00000567426 208 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC064872.1-201ENST00000604823 1072 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 AC091931.1-201ENST00000623488 728 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms