Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC069257.2-201ENST00000441819 155 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC233266.1-201ENST00000454518 96 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 FCF1P6-201ENST00000456841 595 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 snoU13.21-201ENST00000459368 105 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 RPS3AP17-201ENST00000472594 777 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC097065.2-201ENST00000608159 533 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC242852.1-201ENST00000612151 96 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC244015.1-201ENST00000622301 99 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RNU6-989P-201ENST00000362756 107 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RNY3P5-201ENST00000384127 102 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC078974.1-201ENST00000411597 223 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 MTATP6P16-201ENST00000434543 526 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 MTND4P19-201ENST00000446659 478 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC090079.2-201ENST00000575289 768 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC025627.3-201ENST00000582078 182 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC008121.1-201ENST00000603244 268 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC009237.15-201ENST00000610252 501 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 Z99571.1-201ENST00000636677 394 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RNA5SP128-201ENST00000365305 116 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC114482.1-201ENST00000418010 247 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC092573.2-201ENST00000434546 243 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RNF138P1-201ENST00000502765 546 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC125611.1-201ENST00000549563 229 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC091057.3-201ENST00000602684 733 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 MIR224-201ENST00000384889 81 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 MIR644A-201ENST00000385262 94 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RPL7P55-201ENST00000450522 746 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC098869.1-201ENST00000481627 292 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 RNU6-798P-201ENST00000516912 103 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC069304.2-201ENST00000605154 435 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AL591926.4-201ENST00000616895 298 ntBASIC-0.18□□□□□ -2.44
VPS13DQ5THJ4 AC092268.1-201ENST00000342691 405 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 MIR29C-201ENST00000385231 88 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC010469.2-201ENST00000496412 480 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC092325.1-201ENST00000566449 554 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC068647.2-201ENST00000637380 353 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 SNORA1.1-201ENST00000364671 133 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 MIR1468-201ENST00000410600 86 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC092634.6-201ENST00000418558 192 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 RPS15AP9-201ENST00000439856 381 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AF228730.1-201ENST00000397972 663 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 RNA5SP118-201ENST00000410385 109 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 BTF3P8-201ENST00000414577 526 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC063976.4-201ENST00000421971 163 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 MTCO2P34-201ENST00000421994 607 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 AL359854.1-201ENST00000614203 1594 ntBASIC-0.19□□□□□ -2.44
VPS13DQ5THJ4 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 TAF9BP2-201ENST00000400856 499 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 MTCO3P45-201ENST00000443036 613 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 MIR635-201ENST00000384830 98 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 MIR140-201ENST00000385282 100 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 RPS15AP38-201ENST00000413110 372 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 AL590632.1-201ENST00000424289 371 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 RAD1P2-201ENST00000446414 663 ntBASIC-0.2□□□□□ -2.44
VPS13DQ5THJ4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms