Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 FAM35BP-202ENST00000497389 3337 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
E2F1Q01094 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
E2F1Q01094 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F1Q01094 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-884P-201ENST00000363889 107 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 SNORA80A-201ENST00000363922 136 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 SNORA63C-201ENST00000364578 129 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-790P-201ENST00000384479 105 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-658P-201ENST00000384606 106 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 SNORA41-201ENST00000384675 132 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 MIR518D-201ENST00000385014 87 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC243428.1-201ENST00000421099 264 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AL035666.1-201ENST00000446195 348 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 snoU109.2-201ENST00000459316 135 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC008571.1-201ENST00000467232 300 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-470P-201ENST00000515954 104 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-307P-201ENST00000516743 106 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC103996.1-201ENST00000555468 102 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC005899.2-201ENST00000584353 90 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F1Q01094 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
E2F1Q01094 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
E2F1Q01094 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F1Q01094 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F1Q01094 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
E2F1Q01094 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
E2F1Q01094 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
E2F1Q01094 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.18□□□□□ -1.9
E2F1Q01094 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
E2F1Q01094 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 Y_RNA.252-201ENST00000364556 101 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RNU6-1317P-201ENST00000364582 104 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RNU5E-7P-201ENST00000365290 117 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RNU6-933P-201ENST00000384424 107 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 SNORA1.3-201ENST00000384676 136 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RPS4XP3-201ENST00000398541 413 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AL513475.1-201ENST00000406602 315 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RNU6-55P-201ENST00000411092 107 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
E2F1Q01094 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AC098831.1-201ENST00000440661 216 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.18□□□□□ -1.9
E2F1Q01094 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RPL9P9-202ENST00000466501 579 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AC006445.2-201ENST00000510061 472 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RN7SKP295-201ENST00000517264 153 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 RNU6-988P-201ENST00000519081 107 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
E2F1Q01094 LINC00933-203ENST00000559812 219 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.18□□□□□ -1.9
E2F1Q01094 AC116312.1-201ENST00000606841 314 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 U4.7-201ENST00000638126 106 ntBASIC3.18□□□□□ -1.9
E2F1Q01094 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
E2F1Q01094 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
E2F1Q01094 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.17□□□□□ -1.9
E2F1Q01094 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 RNU6-490P-201ENST00000362985 107 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 Y_RNA.148-201ENST00000363557 117 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 NDUFS5P4-201ENST00000412983 318 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AC011816.1-201ENST00000441346 546 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 RN7SL863P-201ENST00000462370 296 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 RPS27AP10-201ENST00000496103 208 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.17□□□□□ -1.9
E2F1Q01094 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 AC022493.2-201ENST00000506122 481 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.17□□□□□ -1.9
E2F1Q01094 ACA59.1-201ENST00000515966 143 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.17□□□□□ -1.9
E2F1Q01094 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AC018889.1-201ENST00000605372 397 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AL162730.1-201ENST00000605734 292 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 MIR3976-201ENST00000606807 139 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
E2F1Q01094 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms