Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RPS15AP9-201ENST00000439856 381 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
PRKDCP78527 AC116347.2-201ENST00000514912 523 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 AC107304.1-201ENST00000604229 296 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL591034.2-201ENST00000402839 359 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 RNU6-233P-201ENST00000410845 141 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 ISCA1P1-201ENST00000426679 387 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 AC008494.2-201ENST00000514544 370 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC104417.1-201ENST00000523974 751 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.07□□□□□ -2.4
PRKDCP78527 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 RNU4-32P-201ENST00000363404 141 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 MIR601-201ENST00000385256 79 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 MTCYBP38-201ENST00000417160 1123 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AL162395.1-201ENST00000457882 422 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 ROCK1P1-201ENST00000573767 549 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 Y_RNA.804-201ENST00000615262 101 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC073968.1-201ENST00000618594 637 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 Y_RNA.413-201ENST00000384007 102 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 RNY3P5-201ENST00000384127 102 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 YWHAZP8-201ENST00000436935 731 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AL714022.1-201ENST00000439897 151 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 Y_RNA.754-201ENST00000476024 102 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC116337.2-201ENST00000477662 156 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC110760.3-202ENST00000515177 371 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.06□□□□□ -2.4
PRKDCP78527 CYCSP27-201ENST00000527643 293 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC004775.1-201ENST00000607389 753 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 Y_RNA.790-201ENST00000614282 102 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 Y_RNA.782-201ENST00000614695 102 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
PRKDCP78527 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
PRKDCP78527 RPL22P22-201ENST00000395439 379 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.06□□□□□ -2.4
PRKDCP78527 RNU2-49P-201ENST00000410666 184 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.06□□□□□ -2.4
PRKDCP78527 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.06□□□□□ -2.4
PRKDCP78527 AC022483.1-201ENST00000514020 567 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC009033.1-201ENST00000624279 431 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 RNU6-348P-201ENST00000384386 107 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC138623.1-201ENST00000418060 216 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.06□□□□□ -2.4
PRKDCP78527 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.06□□□□□ -2.4
PRKDCP78527 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.06□□□□□ -2.4
PRKDCP78527 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.06□□□□□ -2.4
PRKDCP78527 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 MIR4275-201ENST00000636486 87 ntBASIC0.06□□□□□ -2.4
PRKDCP78527 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 MIR514A1-201ENST00000385133 98 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AL121978.1-201ENST00000402778 359 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RPS26P5-201ENST00000418544 335 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.05□□□□□ -2.4
PRKDCP78527 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.05□□□□□ -2.4
PRKDCP78527 AC025465.4-201ENST00000513422 638 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RN7SKP287-201ENST00000516546 266 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.05□□□□□ -2.4
PRKDCP78527 AC004805.2-201ENST00000605382 482 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC017104.5-201ENST00000637647 639 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 Y_RNA.288-201ENST00000364854 92 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RNU6-1151P-201ENST00000384684 107 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RNA5SP496-201ENST00000391240 109 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC139712.2-201ENST00000424302 339 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
PRKDCP78527 RNU7-90P-201ENST00000459216 62 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 snoU13.21-201ENST00000459368 105 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 IGKV1-22-201ENST00000524313 326 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC124293.1-201ENST00000530034 493 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.05□□□□□ -2.4
PRKDCP78527 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.05□□□□□ -2.4
PRKDCP78527 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 SNORD114-3-201ENST00000364969 75 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 Y_RNA.375-201ENST00000365625 101 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 MIR135A2-201ENST00000384854 100 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AL592310.1-201ENST00000414330 671 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 MTND1P20-201ENST00000430341 950 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RPL30P7-201ENST00000479312 323 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC074198.2-201ENST00000508153 258 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.05□□□□□ -2.4
PRKDCP78527 AC104057.1-201ENST00000515547 497 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.05□□□□□ -2.4
PRKDCP78527 AL158211.1-201ENST00000566763 763 ntBASIC0.05□□□□□ -2.4
PRKDCP78527 RNU2-15P-201ENST00000410692 191 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 MTND4LP11-201ENST00000422184 280 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 PNRC2P1-201ENST00000423940 420 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 CETN4P-201ENST00000432407 469 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.04□□□□□ -2.4
PRKDCP78527 RNU6-491P-201ENST00000516099 110 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 AL132822.1-201ENST00000617063 513 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms