Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH12P55289 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH12P55289 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CDH12P55289 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.8□□□□□ -1.96
CDH12P55289 AC103988.1-201ENST00000566382 2177 ntBASIC2.8□□□□□ -1.96
CDH12P55289 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.8□□□□□ -1.96
CDH12P55289 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH12P55289 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.8□□□□□ -1.96
CDH12P55289 RNU6-105P-201ENST00000363909 104 ntBASIC2.8□□□□□ -1.96
CDH12P55289 RNU6-1280P-201ENST00000365211 107 ntBASIC2.8□□□□□ -1.96
CDH12P55289 SNORD42.2-201ENST00000365570 69 ntBASIC2.8□□□□□ -1.96
CDH12P55289 RNU6-790P-201ENST00000384479 105 ntBASIC2.8□□□□□ -1.96
CDH12P55289 SAR1AP2-201ENST00000392696 594 ntBASIC2.8□□□□□ -1.96
CDH12P55289 RPS29P13-201ENST00000402041 169 ntBASIC2.8□□□□□ -1.96
CDH12P55289 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH12P55289 MTCO2P12-201ENST00000427426 682 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH12P55289 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH12P55289 AC005326.1-201ENST00000429197 123 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH12P55289 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH12P55289 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH12P55289 AC027575.1-201ENST00000481064 460 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH12P55289 AC093303.1-201ENST00000514549 295 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH12P55289 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH12P55289 AC080078.3-201ENST00000605407 463 ntBASIC2.8□□□□□ -1.96
CDH12P55289 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.8□□□□□ -1.96
CDH12P55289 AC097372.5-201ENST00000623665 376 ntBASIC2.8□□□□□ -1.96
CDH12P55289 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH12P55289 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH12P55289 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDH12P55289 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH12P55289 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDH12P55289 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH12P55289 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CDH12P55289 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
CDH12P55289 Y_RNA.187-201ENST00000363918 113 ntBASIC2.79□□□□□ -1.96
CDH12P55289 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.79□□□□□ -1.96
CDH12P55289 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
CDH12P55289 RNU6-1106P-201ENST00000390845 107 ntBASIC2.79□□□□□ -1.96
CDH12P55289 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
CDH12P55289 RNU2-49P-201ENST00000410666 184 ntBASIC2.79□□□□□ -1.96
CDH12P55289 AL365496.1-201ENST00000426885 215 ntBASIC2.79□□□□□ -1.96
CDH12P55289 Z82205.1-201ENST00000428456 297 ntBASIC2.79□□□□□ -1.96
CDH12P55289 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH12P55289 AC006028.1-201ENST00000438379 402 ntBASIC2.79□□□□□ -1.96
CDH12P55289 DAP3P1-201ENST00000441522 278 ntBASIC2.79□□□□□ -1.96
CDH12P55289 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH12P55289 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH12P55289 AC097473.1-201ENST00000508142 408 ntBASIC2.79□□□□□ -1.96
CDH12P55289 RNA5SP384-201ENST00000516615 116 ntBASIC2.79□□□□□ -1.96
CDH12P55289 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
CDH12P55289 RNU6-711P-201ENST00000517255 106 ntBASIC2.79□□□□□ -1.96
CDH12P55289 ANP32BP3-201ENST00000559213 706 ntBASIC2.79□□□□□ -1.96
CDH12P55289 AL133393.1-201ENST00000603277 287 ntBASIC2.79□□□□□ -1.96
CDH12P55289 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH12P55289 PISRT1.1-201ENST00000616930 107 ntBASIC2.79□□□□□ -1.96
CDH12P55289 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.79□□□□□ -1.96
CDH12P55289 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.79□□□□□ -1.96
CDH12P55289 MIR3199-2-201ENST00000636243 86 ntBASIC2.79□□□□□ -1.96
CDH12P55289 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH12P55289 AC233263.6-201ENST00000631132 1963 ntBASIC2.79□□□□□ -1.96
CDH12P55289 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH12P55289 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CDH12P55289 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDH12P55289 AC073325.2-201ENST00000339545 159 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDH12P55289 MIR369-201ENST00000362155 70 ntBASIC2.78□□□□□ -1.96
CDH12P55289 XGY1-201ENST00000381172 446 ntBASIC2.78□□□□□ -1.96
CDH12P55289 RNU6-1227P-201ENST00000383981 107 ntBASIC2.78□□□□□ -1.96
CDH12P55289 RNU6-890P-201ENST00000384121 107 ntBASIC2.78□□□□□ -1.96
CDH12P55289 SNORD116-20-201ENST00000384529 92 ntBASIC2.78□□□□□ -1.96
CDH12P55289 RNU6-331P-201ENST00000384724 107 ntBASIC2.78□□□□□ -1.96
CDH12P55289 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH12P55289 AC092017.2-201ENST00000427600 362 ntBASIC2.78□□□□□ -1.96
CDH12P55289 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH12P55289 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH12P55289 AL161651.1-201ENST00000440882 223 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MTCYBP6-201ENST00000441810 138 ntBASIC2.78□□□□□ -1.96
CDH12P55289 Y_RNA.639-201ENST00000458981 102 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
CDH12P55289 RNU6-612P-201ENST00000516909 102 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC022634.1-201ENST00000520765 532 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH12P55289 CR383656.8-201ENST00000549046 145 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC004852.3-201ENST00000614131 326 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MIR7112-201ENST00000616126 65 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC007742.2-201ENST00000618226 398 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC007318.2-201ENST00000620999 243 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC090971.5-201ENST00000621102 293 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
CDH12P55289 AC092435.3-201ENST00000565538 3654 ntBASIC2.78□□□□□ -1.96
CDH12P55289 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH12P55289 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH12P55289 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH12P55289 RNU6-858P-201ENST00000362436 107 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms