Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL121601.2-201ENST00000438019 707 ntBASIC2.58□□□□□ -2
HNF4AP41235 AC097462.2-201ENST00000504623 481 ntBASIC2.58□□□□□ -2
HNF4AP41235 SMURF2P1-201ENST00000514992 481 ntBASIC2.58□□□□□ -2
HNF4AP41235 RNU6-1038P-201ENST00000516516 104 ntBASIC2.58□□□□□ -2
HNF4AP41235 AC023050.3-201ENST00000541142 333 ntBASIC2.58□□□□□ -2
HNF4AP41235 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.58□□□□□ -2
HNF4AP41235 AC005730.3-201ENST00000583067 366 ntBASIC2.58□□□□□ -2
HNF4AP41235 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
HNF4AP41235 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.58□□□□□ -2
HNF4AP41235 BNIP3P10-201ENST00000605360 577 ntBASIC2.58□□□□□ -2
HNF4AP41235 SNORD14A-201ENST00000606526 91 ntBASIC2.58□□□□□ -2
HNF4AP41235 AL359547.2-201ENST00000615810 418 ntBASIC2.58□□□□□ -2
HNF4AP41235 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.58□□□□□ -2
HNF4AP41235 AC138627.2-201ENST00000624202 601 ntBASIC2.58□□□□□ -2
HNF4AP41235 AC009033.1-201ENST00000624279 431 ntBASIC2.58□□□□□ -2
HNF4AP41235 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.58□□□□□ -2
HNF4AP41235 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HNF4AP41235 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HNF4AP41235 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
HNF4AP41235 Y_RNA.231-201ENST00000364358 102 ntBASIC2.57□□□□□ -2
HNF4AP41235 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HNF4AP41235 RNU6-166P-201ENST00000384371 107 ntBASIC2.57□□□□□ -2
HNF4AP41235 RNU6-1127P-201ENST00000384580 107 ntBASIC2.57□□□□□ -2
HNF4AP41235 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.57□□□□□ -2
HNF4AP41235 NDUFB4P4-201ENST00000404822 243 ntBASIC2.57□□□□□ -2
HNF4AP41235 RNA5SP118-201ENST00000410385 109 ntBASIC2.57□□□□□ -2
HNF4AP41235 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
HNF4AP41235 RNU6-1148P-201ENST00000410992 104 ntBASIC2.57□□□□□ -2
HNF4AP41235 RPL21P111-201ENST00000418453 477 ntBASIC2.57□□□□□ -2
HNF4AP41235 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.57□□□□□ -2
HNF4AP41235 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.57□□□□□ -2
HNF4AP41235 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
HNF4AP41235 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.57□□□□□ -2
HNF4AP41235 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
HNF4AP41235 RPL7P12-201ENST00000446719 750 ntBASIC2.57□□□□□ -2
HNF4AP41235 MTND3P10-201ENST00000450967 341 ntBASIC2.57□□□□□ -2
HNF4AP41235 SCARNA18-201ENST00000459004 134 ntBASIC2.57□□□□□ -2
HNF4AP41235 AP001486.1-201ENST00000463339 476 ntBASIC2.57□□□□□ -2
HNF4AP41235 RPL21P99-201ENST00000480369 423 ntBASIC2.57□□□□□ -2
HNF4AP41235 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.57□□□□□ -2
HNF4AP41235 AC008526.1-201ENST00000509149 338 ntBASIC2.57□□□□□ -2
HNF4AP41235 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.57□□□□□ -2
HNF4AP41235 AC025465.4-201ENST00000513422 638 ntBASIC2.57□□□□□ -2
HNF4AP41235 RNU6-507P-201ENST00000516045 100 ntBASIC2.57□□□□□ -2
HNF4AP41235 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.57□□□□□ -2
HNF4AP41235 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.57□□□□□ -2
HNF4AP41235 CENPUP1-201ENST00000526649 1202 ntBASIC2.57□□□□□ -2
HNF4AP41235 AL137161.1-201ENST00000532231 390 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC078814.3-201ENST00000553036 491 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC009127.3-201ENST00000570531 403 ntBASIC2.57□□□□□ -2
HNF4AP41235 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
HNF4AP41235 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.57□□□□□ -2
HNF4AP41235 RNU6-91P-201ENST00000607774 107 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.57□□□□□ -2
HNF4AP41235 AC022306.2-201ENST00000617563 647 ntBASIC2.57□□□□□ -2
HNF4AP41235 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.57□□□□□ -2
HNF4AP41235 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.57□□□□□ -2
HNF4AP41235 AC090617.10-201ENST00000624308 134 ntBASIC2.57□□□□□ -2
HNF4AP41235 AL008636.1-201ENST00000625038 1018 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC100810.6-201ENST00000638068 285 ntBASIC2.57□□□□□ -2
HNF4AP41235 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.56□□□□□ -2
HNF4AP41235 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.56□□□□□ -2
HNF4AP41235 AC138393.1-203ENST00000327086 343 ntBASIC2.56□□□□□ -2
HNF4AP41235 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
HNF4AP41235 Y_RNA.279-201ENST00000364763 95 ntBASIC2.56□□□□□ -2
HNF4AP41235 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
HNF4AP41235 MIR518D-201ENST00000385014 87 ntBASIC2.56□□□□□ -2
HNF4AP41235 AL356057.3-201ENST00000402607 340 ntBASIC2.56□□□□□ -2
HNF4AP41235 AL078595.1-201ENST00000404458 226 ntBASIC2.56□□□□□ -2
HNF4AP41235 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
HNF4AP41235 RNU4-46P-201ENST00000410818 138 ntBASIC2.56□□□□□ -2
HNF4AP41235 RNU6-373P-201ENST00000411247 98 ntBASIC2.56□□□□□ -2
HNF4AP41235 AL160275.3-201ENST00000423876 471 ntBASIC2.56□□□□□ -2
HNF4AP41235 ERLEC1P1-201ENST00000433806 578 ntBASIC2.56□□□□□ -2
HNF4AP41235 AC104058.1-201ENST00000448028 297 ntBASIC2.56□□□□□ -2
HNF4AP41235 MTND5P20-201ENST00000448677 143 ntBASIC2.56□□□□□ -2
HNF4AP41235 HMGN2P26-201ENST00000463169 339 ntBASIC2.56□□□□□ -2
HNF4AP41235 HMGN1P12-201ENST00000499125 195 ntBASIC2.56□□□□□ -2
HNF4AP41235 AC008628.2-201ENST00000502605 298 ntBASIC2.56□□□□□ -2
HNF4AP41235 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.56□□□□□ -2
HNF4AP41235 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
HNF4AP41235 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.56□□□□□ -2
HNF4AP41235 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
HNF4AP41235 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.56□□□□□ -2
HNF4AP41235 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.56□□□□□ -2
HNF4AP41235 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
HNF4AP41235 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.56□□□□□ -2
HNF4AP41235 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.56□□□□□ -2
HNF4AP41235 AC018638.8-201ENST00000588755 281 ntBASIC2.56□□□□□ -2
HNF4AP41235 AL670379.10-201ENST00000604330 253 ntBASIC2.56□□□□□ -2
HNF4AP41235 AL670379.9-201ENST00000605428 253 ntBASIC2.56□□□□□ -2
HNF4AP41235 uc_338.34-201ENST00000617467 174 ntBASIC2.56□□□□□ -2
HNF4AP41235 MTND4P14-201ENST00000435799 1354 ntBASIC2.56□□□□□ -2
HNF4AP41235 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HNF4AP41235 Y_RNA.70-201ENST00000362886 110 ntBASIC2.55□□□□□ -2
HNF4AP41235 Y_RNA.167-201ENST00000363735 109 ntBASIC2.55□□□□□ -2
HNF4AP41235 RNU6-371P-201ENST00000364283 108 ntBASIC2.55□□□□□ -2
HNF4AP41235 RNU6-522P-201ENST00000364497 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms