Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.1□□□□□ -2.23
COL4A1P02462 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC013828.2-201ENST00000532487 235 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC008121.1-201ENST00000603244 268 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC112191.3-201ENST00000604371 277 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU6-87P-201ENST00000607561 108 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL4A1P02462 AC103706.2-201ENST00000638080 240 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL4A1P02462 RNU6-960P-201ENST00000364056 120 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU6-512P-201ENST00000364438 103 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU6-769P-201ENST00000384407 104 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 Y_RNA.560-201ENST00000384689 102 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 MIR193B-201ENST00000384907 83 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL513475.1-201ENST00000406602 315 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU2-41P-201ENST00000410991 178 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 RPL22P18-201ENST00000417197 377 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 SEPT2P1-201ENST00000419651 180 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC013410.2-201ENST00000422627 201 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC011233.1-201ENST00000422812 283 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AL589872.1-201ENST00000426602 288 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 GTF2IP20-201ENST00000431663 360 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RPS15AP5-201ENST00000436276 388 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC118469.1-201ENST00000442943 488 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A1P02462 MTND2P14-201ENST00000482139 351 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC022878.1-201ENST00000530684 149 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 LINC00933-203ENST00000559812 219 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 MIR4529-201ENST00000578110 78 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 MIR3167-201ENST00000579623 85 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A1P02462 7SK.7-201ENST00000603504 247 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL031281.1-201ENST00000604049 488 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL020996.3-201ENST00000606617 222 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC122133.1-201ENST00000613964 233 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A1P02462 MTND4P16-201ENST00000466108 1367 ntBASIC1.09□□□□□ -2.23
COL4A1P02462 AC092104.1-201ENST00000497346 1441 ntBASIC1.09□□□□□ -2.23
COL4A1P02462 Y_RNA.46-201ENST00000362695 102 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 RNU6-931P-201ENST00000363850 107 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 RNU6-19P-201ENST00000384718 107 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 ELOCP17-201ENST00000414751 326 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC010099.3-201ENST00000423896 409 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 Z80107.1-201ENST00000436830 412 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 FABP5P14-201ENST00000437273 393 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 RSU1P2-202ENST00000437884 485 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 HSPE1P24-201ENST00000450782 238 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 HAR1A.1-201ENST00000459583 118 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC107626.1-201ENST00000471084 183 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.09□□□□□ -2.24
COL4A1P02462 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.09□□□□□ -2.24
COL4A1P02462 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A1P02462 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A1P02462 SNORA3.4-201ENST00000515969 96 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 RNU6-415P-201ENST00000516252 97 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 SNORA31.25-201ENST00000517242 134 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AP006587.4-201ENST00000526053 529 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.09□□□□□ -2.24
COL4A1P02462 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.09□□□□□ -2.24
COL4A1P02462 AC005771.1-201ENST00000585581 349 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 OR1M4P-201ENST00000589199 287 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC105148.1-201ENST00000604961 409 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC018714.1-201ENST00000605028 208 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 BCRP9-201ENST00000605312 388 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AL031775.1-201ENST00000607014 887 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.09□□□□□ -2.24
COL4A1P02462 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A1P02462 AL365204.3-201ENST00000612448 685 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC130324.3-201ENST00000614165 542 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC009878.1-201ENST00000621819 340 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 AC006927.3-201ENST00000638789 384 ntBASIC1.09□□□□□ -2.24
COL4A1P02462 Y_RNA.97-201ENST00000363094 102 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL4A1P02462 SNORA40C-201ENST00000391285 128 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC068050.1-201ENST00000394891 380 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 MTCYBP36-201ENST00000404146 440 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.08□□□□□ -2.24
COL4A1P02462 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 HMGN2P10-201ENST00000448085 265 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AL133217.1-201ENST00000450980 425 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC055731.1-201ENST00000474387 401 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC092989.1-201ENST00000481235 277 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 RPL36AP48-201ENST00000485521 314 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.08□□□□□ -2.24
COL4A1P02462 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 AC091965.2-201ENST00000512324 613 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms