Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 RNU6-6P-201ENST00000606623 107 ntBASIC3.2□□□□□ -1.9
CTIFO43310 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
CTIFO43310 Z69720.2-201ENST00000624755 279 ntBASIC3.2□□□□□ -1.9
CTIFO43310 AC134503.1-201ENST00000633048 54 ntBASIC3.2□□□□□ -1.9
CTIFO43310 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.2□□□□□ -1.9
CTIFO43310 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTIFO43310 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
CTIFO43310 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
CTIFO43310 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTIFO43310 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
CTIFO43310 RNU1-35P-201ENST00000362782 153 ntBASIC3.19□□□□□ -1.9
CTIFO43310 Z98749.2-208ENST00000381646 500 ntBASIC3.19□□□□□ -1.9
CTIFO43310 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
CTIFO43310 MIR548P-201ENST00000408336 84 ntBASIC3.19□□□□□ -1.9
CTIFO43310 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
CTIFO43310 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.19□□□□□ -1.9
CTIFO43310 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.19□□□□□ -1.9
CTIFO43310 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTIFO43310 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.19□□□□□ -1.9
CTIFO43310 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.19□□□□□ -1.9
CTIFO43310 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTIFO43310 RNU7-152P-201ENST00000458982 64 ntBASIC3.19□□□□□ -1.9
CTIFO43310 snoU109.2-201ENST00000459316 135 ntBASIC3.19□□□□□ -1.9
CTIFO43310 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTIFO43310 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CTIFO43310 IMMP1LP2-201ENST00000552954 492 ntBASIC3.19□□□□□ -1.9
CTIFO43310 MIR5195-201ENST00000583555 115 ntBASIC3.19□□□□□ -1.9
CTIFO43310 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
CTIFO43310 AC008121.1-201ENST00000603244 268 ntBASIC3.19□□□□□ -1.9
CTIFO43310 AL360085.1-201ENST00000604713 532 ntBASIC3.19□□□□□ -1.9
CTIFO43310 AC123912.5-201ENST00000605470 343 ntBASIC3.19□□□□□ -1.9
CTIFO43310 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
CTIFO43310 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.19□□□□□ -1.9
CTIFO43310 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
CTIFO43310 AC007318.2-201ENST00000620999 243 ntBASIC3.19□□□□□ -1.9
CTIFO43310 AC010297.1-201ENST00000623948 149 ntBASIC3.19□□□□□ -1.9
CTIFO43310 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
CTIFO43310 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTIFO43310 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTIFO43310 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RNU6-898P-201ENST00000365627 104 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RNU6-72P-201ENST00000384285 79 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RNVU1-14-201ENST00000384770 164 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RNU6-1106P-201ENST00000390845 107 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
CTIFO43310 SNORA75.4-201ENST00000391278 119 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL360182.1-201ENST00000397433 468 ntBASIC3.18□□□□□ -1.9
CTIFO43310 MTCYBP4-201ENST00000401524 249 ntBASIC3.18□□□□□ -1.9
CTIFO43310 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.18□□□□□ -1.9
CTIFO43310 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
CTIFO43310 MTND2P23-201ENST00000422990 651 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL590632.1-201ENST00000424289 371 ntBASIC3.18□□□□□ -1.9
CTIFO43310 RPL7P37-201ENST00000425095 738 ntBASIC3.18□□□□□ -1.9
CTIFO43310 UBE2V1P4-201ENST00000425374 344 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
CTIFO43310 AL714022.1-201ENST00000439897 151 ntBASIC3.18□□□□□ -1.9
CTIFO43310 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AC087190.1-201ENST00000484462 480 ntBASIC3.18□□□□□ -1.9
CTIFO43310 Y_RNA.687-201ENST00000516558 91 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.18□□□□□ -1.9
CTIFO43310 HMGN2P15-201ENST00000585707 270 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
CTIFO43310 SNRPGP17-201ENST00000603780 214 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL162713.1-201ENST00000604480 262 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL080274.1-201ENST00000605565 220 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AL161629.2-201ENST00000615347 275 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AC110491.1-201ENST00000562191 2010 ntBASIC3.18□□□□□ -1.9
CTIFO43310 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
CTIFO43310 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
CTIFO43310 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.18□□□□□ -1.9
CTIFO43310 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTIFO43310 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
CTIFO43310 MTND4P27-201ENST00000450813 1354 ntBASIC3.17□□□□□ -1.9
CTIFO43310 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTIFO43310 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.17□□□□□ -1.9
CTIFO43310 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.17□□□□□ -1.9
CTIFO43310 Y_RNA.128-201ENST00000363391 112 ntBASIC3.17□□□□□ -1.9
CTIFO43310 RNU6-1188P-201ENST00000363795 107 ntBASIC3.17□□□□□ -1.9
CTIFO43310 RNU6-1329P-201ENST00000365664 107 ntBASIC3.17□□□□□ -1.9
CTIFO43310 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
CTIFO43310 Z82205.1-201ENST00000428456 297 ntBASIC3.17□□□□□ -1.9
CTIFO43310 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CTIFO43310 AC098831.1-201ENST00000440661 216 ntBASIC3.17□□□□□ -1.9
CTIFO43310 MTND4P19-201ENST00000446659 478 ntBASIC3.17□□□□□ -1.9
CTIFO43310 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.17□□□□□ -1.9
CTIFO43310 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.17□□□□□ -1.9
CTIFO43310 RNU7-23P-201ENST00000459465 62 ntBASIC3.17□□□□□ -1.9
CTIFO43310 AC096745.1-201ENST00000509945 370 ntBASIC3.17□□□□□ -1.9
CTIFO43310 AC113155.1-201ENST00000511141 769 ntBASIC3.17□□□□□ -1.9
CTIFO43310 AC092436.3-201ENST00000511788 257 ntBASIC3.17□□□□□ -1.9
CTIFO43310 RNU6-711P-201ENST00000517255 106 ntBASIC3.17□□□□□ -1.9
CTIFO43310 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTIFO43310 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.17□□□□□ -1.9
CTIFO43310 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
CTIFO43310 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
CTIFO43310 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.17□□□□□ -1.9
CTIFO43310 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.17□□□□□ -1.9
CTIFO43310 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
CTIFO43310 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms