Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC123767.1-202ENST00000620407 817 ntBASIC0.33□□□□□ -2.36
CHD1O14646 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.33□□□□□ -2.36
CHD1O14646 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHD1O14646 DBF4P1-201ENST00000412976 1892 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AC114482.1-201ENST00000418010 247 ntBASIC0.33□□□□□ -2.36
CHD1O14646 RPL32P14-201ENST00000463196 378 ntBASIC0.33□□□□□ -2.36
CHD1O14646 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHD1O14646 COX6CP6-201ENST00000490840 228 ntBASIC0.33□□□□□ -2.36
CHD1O14646 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.33□□□□□ -2.36
CHD1O14646 SNORA14.1-201ENST00000516113 141 ntBASIC0.33□□□□□ -2.36
CHD1O14646 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.33□□□□□ -2.36
CHD1O14646 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.33□□□□□ -2.36
CHD1O14646 AL132822.1-201ENST00000617063 513 ntBASIC0.33□□□□□ -2.36
CHD1O14646 RNU4-73P-201ENST00000363164 141 ntBASIC0.32□□□□□ -2.36
CHD1O14646 Y_RNA.245-201ENST00000364493 95 ntBASIC0.32□□□□□ -2.36
CHD1O14646 MIR597-201ENST00000384968 97 ntBASIC0.32□□□□□ -2.36
CHD1O14646 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD1O14646 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD1O14646 ELOCP14-201ENST00000428070 331 ntBASIC0.32□□□□□ -2.36
CHD1O14646 PTGES3P1-201ENST00000439531 483 ntBASIC0.32□□□□□ -2.36
CHD1O14646 ELOCP7-201ENST00000439968 331 ntBASIC0.32□□□□□ -2.36
CHD1O14646 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
CHD1O14646 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.32□□□□□ -2.36
CHD1O14646 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.32□□□□□ -2.36
CHD1O14646 NDUFA8P1-201ENST00000605525 367 ntBASIC0.32□□□□□ -2.36
CHD1O14646 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.32□□□□□ -2.36
CHD1O14646 SNORD114-19-201ENST00000363072 75 ntBASIC0.31□□□□□ -2.36
CHD1O14646 RNU6-673P-201ENST00000365084 104 ntBASIC0.31□□□□□ -2.36
CHD1O14646 Y_RNA.324-201ENST00000365165 102 ntBASIC0.31□□□□□ -2.36
CHD1O14646 RNU6-45P-201ENST00000384471 107 ntBASIC0.31□□□□□ -2.36
CHD1O14646 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.31□□□□□ -2.36
CHD1O14646 SKA2P1-201ENST00000425592 390 ntBASIC0.31□□□□□ -2.36
CHD1O14646 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD1O14646 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.31□□□□□ -2.36
CHD1O14646 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.31□□□□□ -2.36
CHD1O14646 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD1O14646 AC022616.8-201ENST00000533569 253 ntBASIC0.31□□□□□ -2.36
CHD1O14646 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD1O14646 AC079598.5-201ENST00000547460 117 ntBASIC0.31□□□□□ -2.36
CHD1O14646 AL357075.2-201ENST00000614906 189 ntBASIC0.31□□□□□ -2.36
CHD1O14646 Pinc.1-201ENST00000616452 154 ntBASIC0.31□□□□□ -2.36
CHD1O14646 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
CHD1O14646 Y_RNA.185-201ENST00000363894 100 ntBASIC0.3□□□□□ -2.36
CHD1O14646 Y_RNA.571-201ENST00000384753 98 ntBASIC0.3□□□□□ -2.36
CHD1O14646 SNORA48.1-201ENST00000390879 135 ntBASIC0.3□□□□□ -2.36
CHD1O14646 RNU2-7P-201ENST00000410794 178 ntBASIC0.3□□□□□ -2.36
CHD1O14646 AL592310.1-201ENST00000414330 671 ntBASIC0.3□□□□□ -2.36
CHD1O14646 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHD1O14646 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD1O14646 SNX2P2-201ENST00000424553 323 ntBASIC0.3□□□□□ -2.36
CHD1O14646 HSPE1P9-201ENST00000440046 311 ntBASIC0.3□□□□□ -2.36
CHD1O14646 RNVU1-2-201ENST00000516326 135 ntBASIC0.3□□□□□ -2.36
CHD1O14646 RN7SKP88-201ENST00000516847 250 ntBASIC0.3□□□□□ -2.36
CHD1O14646 SNORA70.22-201ENST00000517160 124 ntBASIC0.3□□□□□ -2.36
CHD1O14646 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD1O14646 BNIP3P27-201ENST00000599991 412 ntBASIC0.3□□□□□ -2.36
CHD1O14646 CLIC4P2-201ENST00000601934 717 ntBASIC0.3□□□□□ -2.36
CHD1O14646 7SK.8-201ENST00000612110 250 ntBASIC0.3□□□□□ -2.36
CHD1O14646 7SK.11-201ENST00000615477 250 ntBASIC0.3□□□□□ -2.36
CHD1O14646 7SK.13-201ENST00000622040 250 ntBASIC0.3□□□□□ -2.36
CHD1O14646 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHD1O14646 RNU6-160P-201ENST00000384591 107 ntBASIC0.3□□□□□ -2.36
CHD1O14646 RPS3AP36-201ENST00000398190 775 ntBASIC0.3□□□□□ -2.36
CHD1O14646 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD1O14646 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD1O14646 AL512310.8-201ENST00000550183 120 ntBASIC0.3□□□□□ -2.36
CHD1O14646 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD1O14646 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD1O14646 AC095057.3-201ENST00000567102 1157 ntBASIC0.3□□□□□ -2.36
CHD1O14646 MIR4667-201ENST00000578933 66 ntBASIC0.3□□□□□ -2.36
CHD1O14646 RPL30P11-203ENST00000598995 310 ntBASIC0.3□□□□□ -2.36
CHD1O14646 AL355802.4-201ENST00000607635 548 ntBASIC0.3□□□□□ -2.36
CHD1O14646 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CHD1O14646 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
CHD1O14646 AC092634.6-201ENST00000418558 192 ntBASIC0.29□□□□□ -2.36
CHD1O14646 TIMM9P1-201ENST00000436122 256 ntBASIC0.29□□□□□ -2.36
CHD1O14646 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
CHD1O14646 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD1O14646 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
CHD1O14646 AP001893.2-201ENST00000526949 202 ntBASIC0.29□□□□□ -2.36
CHD1O14646 BPTFP1-201ENST00000579209 492 ntBASIC0.29□□□□□ -2.36
CHD1O14646 AC092447.10-201ENST00000620607 1652 ntBASIC0.28□□□□□ -2.36
CHD1O14646 Y_RNA.142-201ENST00000363491 102 ntBASIC0.28□□□□□ -2.36
CHD1O14646 MIR200A-201ENST00000384875 90 ntBASIC0.28□□□□□ -2.36
CHD1O14646 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CHD1O14646 RPL26P27-201ENST00000414397 437 ntBASIC0.28□□□□□ -2.36
CHD1O14646 TAF13P2-201ENST00000416876 286 ntBASIC0.28□□□□□ -2.36
CHD1O14646 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD1O14646 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD1O14646 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.28□□□□□ -2.36
CHD1O14646 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD1O14646 AC008088.1-201ENST00000580993 280 ntBASIC0.28□□□□□ -2.36
CHD1O14646 AL590396.4-201ENST00000636779 956 ntBASIC0.28□□□□□ -2.36
CHD1O14646 MIR302D-201ENST00000362275 68 ntBASIC0.27□□□□□ -2.37
CHD1O14646 RNU6-112P-201ENST00000363599 104 ntBASIC0.27□□□□□ -2.37
CHD1O14646 RNA5SP493-201ENST00000364115 91 ntBASIC0.27□□□□□ -2.37
CHD1O14646 RSL24D1P8-201ENST00000434442 492 ntBASIC0.27□□□□□ -2.37
CHD1O14646 GAPDHP17-201ENST00000449858 1001 ntBASIC0.27□□□□□ -2.37
CHD1O14646 MTND3P4-201ENST00000453537 303 ntBASIC0.27□□□□□ -2.37
CHD1O14646 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms