Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC091133.4-201ENST00000511142 308 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 SNORA31.6-201ENST00000516241 130 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 RNA5SP200-201ENST00000516360 103 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 MIR892C-201ENST00000516410 77 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 HSPE1P20-201ENST00000538133 289 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL356280.1-201ENST00000603614 379 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL670379.10-201ENST00000604330 253 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL670379.9-201ENST00000605428 253 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL109809.4-201ENST00000603520 2185 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 FTH1P15-201ENST00000406984 280 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 RAP1BP3-201ENST00000407180 549 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 RNU2-66P-201ENST00000410650 161 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 AC016831.2-201ENST00000417179 352 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 AL360271.2-201ENST00000447710 161 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 RPL23AP20-201ENST00000447965 421 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 RN7SKP40-201ENST00000517211 242 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 CR383656.8-201ENST00000549046 145 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 MTCYBP33-201ENST00000575007 1130 ntBASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM4Q9ULL8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-45P-201ENST00000384471 107 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 RNU2-2P-201ENST00000410396 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-1328P-201ENST00000410938 106 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AC093151.1-201ENST00000427711 313 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 GSTA11P-201ENST00000452866 669 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 TPT1P7-201ENST00000458300 517 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AL121769.1-201ENST00000469473 401 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 MTND3P25-201ENST00000509243 135 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AC011494.1-201ENST00000596454 237 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AC103591.3-201ENST00000608684 209 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.15-201ENST00000611544 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.16-201ENST00000613119 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 AC011890.2-201ENST00000613393 294 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.12-201ENST00000613778 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.20-201ENST00000613956 192 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.9-201ENST00000615427 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.11-201ENST00000616345 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.2-201ENST00000616535 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.3-201ENST00000617785 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.19-201ENST00000618602 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 RNU2-1-201ENST00000618664 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.6-201ENST00000619225 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.5-201ENST00000619465 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 U2.10-201ENST00000620268 191 ntBASIC4.2□□□□□ -1.74
SHROOM4Q9ULL8 SNORD3E-201ENST00000362899 217 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 SNORA25.6-201ENST00000364121 118 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 RNU4-40P-201ENST00000364351 143 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 SNORD14B-201ENST00000364533 90 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 U8.8-201ENST00000365399 135 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 PGBD4P6-201ENST00000421501 610 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 MTCO3P30-201ENST00000426425 670 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC108667.1-201ENST00000428618 249 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 USP9YP14-201ENST00000430663 563 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC027673.1-201ENST00000456245 405 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 RNA5SP112-201ENST00000515937 99 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AP003034.1-201ENST00000534621 422 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC025678.1-201ENST00000567861 338 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC096772.1-201ENST00000609146 564 ntBASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM4Q9ULL8 MTND5P26-201ENST00000426018 1752 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 Y_RNA.269-201ENST00000364685 89 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-72P-201ENST00000384285 79 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-517P-201ENST00000384362 110 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 Y_RNA.481-201ENST00000384373 102 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-434P-201ENST00000384376 107 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU4-55P-201ENST00000410731 137 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-607P-201ENST00000411283 108 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 MTCO3P41-201ENST00000414801 328 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 SNRPFP3-201ENST00000457792 225 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU7-63P-201ENST00000459054 62 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC107401.1-201ENST00000503426 685 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RPPH1-2P-201ENST00000516688 293 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC103987.3-201ENST00000582071 292 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AL158209.2-201ENST00000619266 216 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 SCARNA4-202ENST00000625402 129 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms