Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNA5SP341-201ENST00000516261 117 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-1016P-201ENST00000516689 94 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-928P-201ENST00000516876 104 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC104576.1-201ENST00000524225 88 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AP002404.1-201ENST00000532005 451 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 LARP7P3-201ENST00000579888 337 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-6P-201ENST00000606623 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AL161423.1-201ENST00000613700 262 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 MIR6128-201ENST00000615528 109 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 SNORA7.4-201ENST00000384249 137 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MIR1302-11-201ENST00000408051 138 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MIR1302-9-201ENST00000408365 138 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MIR1302-10-201ENST00000408734 138 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 ELOCP24-201ENST00000456370 334 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 SNORD5.1-201ENST00000458800 75 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 SNORD59.2-201ENST00000516873 68 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC018462.2-201ENST00000605375 395 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AP000654.2-201ENST00000605633 586 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MIR1302-2-201ENST00000607096 138 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
USP29Q9HBJ7 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
USP29Q9HBJ7 RNU6-884P-201ENST00000363889 107 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 MIR518D-201ENST00000385014 87 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC093151.1-201ENST00000427711 313 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC098831.1-201ENST00000440661 216 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 MTCO3P10-201ENST00000455912 772 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AP001486.1-201ENST00000463339 476 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 RPL23AP45-201ENST00000476406 468 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC027575.1-201ENST00000481064 460 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC020661.2-201ENST00000560114 134 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 AC233263.6-201ENST00000631132 1963 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
USP29Q9HBJ7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP29Q9HBJ7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.151-201ENST00000363566 112 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.187-201ENST00000363918 113 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 RNU6-474P-201ENST00000384243 107 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 RNU6-310P-201ENST00000384655 107 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL445529.1-201ENST00000398713 389 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 RPL26P27-201ENST00000414397 437 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AC099548.1-201ENST00000421443 426 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AC013470.1-201ENST00000453438 462 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms