Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LMO3Q8TAP4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL049641.1-201ENST00000441055 1948 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC138393.1-203ENST00000327086 343 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 Y_RNA.158-201ENST00000363651 101 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC117470.1-201ENST00000381974 330 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU6-890P-201ENST00000384121 107 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU6-214P-201ENST00000384130 107 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU2-3P-201ENST00000410144 191 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU6-985P-201ENST00000410182 104 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 CYCSP33-201ENST00000414485 327 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 MCFD2P1-201ENST00000417812 300 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL353621.1-201ENST00000418219 243 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 UBE2V1P4-201ENST00000425374 344 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 MIR2053-201ENST00000459295 91 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 SUMO2P6-201ENST00000505273 288 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC096745.1-201ENST00000509945 370 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 RNU1-54P-201ENST00000517181 120 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC023043.3-201ENST00000593113 385 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC092608.2-201ENST00000624427 218 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AL137790.1-201ENST00000634283 177 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC004925.1-201ENST00000624256 2706 ntBASIC2.88□□□□□ -1.95
LMO3Q8TAP4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LMO3Q8TAP4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 UBE2L2-201ENST00000254302 429 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 DEFB108F-201ENST00000344638 222 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RNU6-1329P-201ENST00000365664 107 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 MIR568-201ENST00000385036 95 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 USP9YP30-201ENST00000430729 455 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC236972.1-201ENST00000433225 199 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC105272.1-201ENST00000438604 198 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RPS24P6-201ENST00000452670 400 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RNU7-138P-201ENST00000459479 64 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RPL7P42-201ENST00000481005 679 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC108860.1-201ENST00000484521 383 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RNU6-470P-201ENST00000515954 104 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 SNORA31.20-201ENST00000517111 133 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC009902.1-201ENST00000519351 183 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC025423.5-201ENST00000550230 219 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 MIR1273C-201ENST00000578669 77 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 MIR4680-201ENST00000580906 66 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC011494.1-201ENST00000596454 237 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AL161423.1-201ENST00000613700 262 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AC083806.3-201ENST00000614016 455 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 PISRT1.1-201ENST00000616930 107 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AL031601.2-202ENST00000622650 282 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 MTND4P1-201ENST00000457501 1466 ntBASIC2.87□□□□□ -1.95
LMO3Q8TAP4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
LMO3Q8TAP4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 RNU6-490P-201ENST00000362985 107 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 MIR514A1-201ENST00000385133 98 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 MRPL42P3-201ENST00000401492 326 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 Z92545.1-201ENST00000411782 234 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 TOMM22P1-201ENST00000418578 312 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AL160004.2-201ENST00000432935 350 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 RPS15AP34-201ENST00000487776 387 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AC022493.1-201ENST00000492984 337 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO3Q8TAP4 AC097462.2-201ENST00000504623 481 ntBASIC2.86□□□□□ -1.95
LMO3Q8TAP4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms