Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC108938.1-201ENST00000451204 136 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AL109933.2-201ENST00000452651 260 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 SNRPGP3-201ENST00000469405 227 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC128713.1-201ENST00000471495 306 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC027575.1-201ENST00000481064 460 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RPL30P14-201ENST00000482744 348 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC018437.1-201ENST00000492214 406 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RNU6-928P-201ENST00000516876 104 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC018462.2-201ENST00000605375 395 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 U2.21-201ENST00000637295 81 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 MTND5P10-201ENST00000603719 1809 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC093010.3-201ENST00000570269 15214 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AP001148.1-201ENST00000624124 2359 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RNU6-933P-201ENST00000384424 107 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RNU6-306P-201ENST00000384617 107 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 SNORD56-201ENST00000413522 71 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC002075.2-201ENST00000425207 252 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC093151.1-201ENST00000427711 313 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AL135938.1-201ENST00000443141 297 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RNU7-187P-201ENST00000458985 68 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC005741.1-201ENST00000511094 432 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC005476.1-201ENST00000554427 397 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 UBL5P2-201ENST00000583788 219 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC008962.1-201ENST00000605729 304 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 RMST_8.1-201ENST00000610287 165 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC244517.12-201ENST00000623581 663 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 SCARNA4-202ENST00000625402 129 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AC134503.1-201ENST00000633048 54 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 MIR7153-201ENST00000637758 57 ntBASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SMC1BQ8NDV3 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AL353746.1-201ENST00000566293 6881 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 RNU6-778P-201ENST00000363269 103 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 MIR517A-201ENST00000385001 87 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 EI24P2-201ENST00000397776 1076 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AL590004.1-201ENST00000405321 300 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AL030996.1-201ENST00000411430 235 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 ELOCP24-201ENST00000456370 334 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC006026.2-201ENST00000457376 180 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 RPL23AP45-201ENST00000476406 468 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC026782.1-201ENST00000512952 449 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC093303.1-201ENST00000514549 295 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 RN7SKP132-201ENST00000516001 208 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 ANP32BP3-201ENST00000559213 706 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 LINC00933-203ENST00000559812 219 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AP000654.2-201ENST00000605633 586 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AC009229.3-201ENST00000608056 282 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AL591516.1-201ENST00000611326 274 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 AL161629.2-201ENST00000615347 275 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 MTND5P7-201ENST00000413558 1798 ntBASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 RNU6-790P-201ENST00000384479 105 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 MIR184-201ENST00000384962 84 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 BTF3P15-201ENST00000455606 336 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 RPL26P9-201ENST00000457466 433 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 SNORD5.1-201ENST00000458800 75 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 snoU109.2-201ENST00000459316 135 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 NACAP3-201ENST00000552100 481 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 CYCSP39-201ENST00000565821 309 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 MIR2682-201ENST00000580305 110 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 AL121917.1-203ENST00000605534 577 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 MTND4P27-201ENST00000450813 1354 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 PWAR6-201ENST00000552334 4618 ntBASIC3.85□□□□□ -1.79
SMC1BQ8NDV3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.84□□□□□ -1.79
SMC1BQ8NDV3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms