Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL353691.1-201ENST00000451332 387 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 RNA5SP168-201ENST00000516642 112 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC109329.1-201ENST00000518744 317 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC012213.3-201ENST00000577199 777 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC004067.1-201ENST00000608733 700 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 MTND4P14-201ENST00000435799 1354 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 FARSBP1-201ENST00000435808 1778 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 RNU2-15P-201ENST00000410692 191 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 UBE2V1P8-201ENST00000437166 265 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC113420.1-201ENST00000507903 571 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 RNA5SP255-201ENST00000516370 107 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC022432.1-201ENST00000595739 310 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 Y_RNA.185-201ENST00000363894 100 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 RNU6-152P-201ENST00000384037 107 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 SNORA51.6-201ENST00000384151 125 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 MIR200A-201ENST00000384875 90 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 MIR1302-8-201ENST00000408342 128 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 RPL21P24-201ENST00000413752 448 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 Z95118.1-201ENST00000421372 247 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 MTND2P9-201ENST00000422293 931 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 HSPE1P9-201ENST00000440046 311 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AP001324.2-201ENST00000461163 319 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 RNU6-758P-201ENST00000516292 89 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 NDUFA8P1-201ENST00000605525 367 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 AC024257.5-201ENST00000612739 531 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.11□□□□□ -2.39
UBR3Q6ZT12 Pinc.1-201ENST00000616452 154 ntBASIC0.11□□□□□ -2.39
UBR3Q6ZT12 RNU4-12P-201ENST00000365233 139 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 RNY4P3-201ENST00000365254 95 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 CETN4P-201ENST00000432407 469 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 OR2AQ1P-201ENST00000451972 200 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 RNA5SP269-201ENST00000459032 137 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 EIF1P4-201ENST00000572664 335 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 MIR3167-201ENST00000579623 85 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC104465.1-201ENST00000611365 139 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 RNU6-778P-201ENST00000363269 103 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 RPL22P22-201ENST00000395439 379 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL356776.1-201ENST00000406574 447 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL392003.1-201ENST00000434394 243 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 TIMM9P1-201ENST00000436122 256 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR3Q6ZT12 snoU13.19-201ENST00000459148 104 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AL049874.1-201ENST00000489560 388 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 CYCTP-201ENST00000504253 315 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 HMGN1P13-201ENST00000505795 138 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 RNU6-667P-201ENST00000517186 102 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC009237.15-201ENST00000610252 501 ntBASIC0.1□□□□□ -2.39
UBR3Q6ZT12 AC023934.1-201ENST00000574529 2389 ntBASIC0.09□□□□□ -2.39
UBR3Q6ZT12 Y_RNA.170-201ENST00000363746 110 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AL109755.1-201ENST00000401791 649 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 RNU6-202P-201ENST00000515998 96 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AC068790.6-201ENST00000602558 258 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AL132822.1-201ENST00000617063 513 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AL158163.2-201ENST00000619110 700 ntBASIC0.09□□□□□ -2.4
UBR3Q6ZT12 AL391994.1-201ENST00000254724 282 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 RNU6-112P-201ENST00000363599 104 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 MIR194-1-201ENST00000384892 85 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AL121978.1-201ENST00000402778 359 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 RPL30P1-201ENST00000488676 339 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AC084024.2-201ENST00000503480 791 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AC118282.2-201ENST00000508739 374 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.08□□□□□ -2.4
UBR3Q6ZT12 ZNF705CP-201ENST00000530515 889 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AP001596.2-201ENST00000608410 312 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AF129408.1-201ENST00000608767 431 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 AC107075.1-201ENST00000613695 314 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 U6.107-201ENST00000637108 79 ntBASIC0.08□□□□□ -2.4
UBR3Q6ZT12 RNU6-349P-201ENST00000362402 107 ntBASIC0.07□□□□□ -2.4
UBR3Q6ZT12 SNORD114-15-201ENST00000364687 72 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms