Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU6-470P-201ENST00000515954 104 ntBASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 RNU6-699P-201ENST00000517081 110 ntBASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 RNU6-264P-201ENST00000517134 104 ntBASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 AC091903.1-201ENST00000624322 454 ntBASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 MTND5P27-201ENST00000428871 1720 ntBASIC3.73□□□□□ -1.81
CCDC178Q5BJE1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 Y_RNA.112-201ENST00000363250 102 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RNA5SP387-201ENST00000364226 106 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RNU6-1317P-201ENST00000364582 104 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RNU6-658P-201ENST00000384606 106 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC096664.2-201ENST00000411843 406 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 SNORD56-201ENST00000413522 71 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AL096701.2-201ENST00000416920 238 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AL133396.1-201ENST00000432048 687 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RPL21P104-201ENST00000464143 478 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RPL23AP45-201ENST00000476406 468 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC006483.1-201ENST00000487308 313 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RN7SL504P-201ENST00000494496 287 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RPL30P5-201ENST00000494923 336 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 RNU6-307P-201ENST00000516743 106 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC103996.1-201ENST00000555468 102 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC009314.1-201ENST00000603871 304 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AL591516.1-201ENST00000611326 274 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 MIR8057-201ENST00000620957 69 ntBASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
CCDC178Q5BJE1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC178Q5BJE1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
CCDC178Q5BJE1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL359693.1-201ENST00000614959 2407 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 SNORD15B-201ENST00000384714 146 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 MIR521-1-201ENST00000384902 87 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 BX276092.3-201ENST00000424182 230 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC098614.2-201ENST00000426040 255 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL353997.1-201ENST00000432936 108 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 HMGN2P20-201ENST00000437531 273 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 FO393415.2-201ENST00000480085 343 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 RPS4XP13-201ENST00000483219 789 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AK3P2-201ENST00000507976 429 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 ACA59.1-201ENST00000515966 143 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 SNORA70.24-201ENST00000517233 118 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 MIR4782-201ENST00000577987 79 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 MIR4273-201ENST00000582824 84 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL645944.1-201ENST00000603857 493 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL161629.2-201ENST00000615347 275 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AC138627.2-201ENST00000624202 601 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 Z69720.2-201ENST00000624755 279 ntBASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC178Q5BJE1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RPL9P7-201ENST00000330965 580 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AL513475.1-201ENST00000406602 315 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 SNORA11.1-201ENST00000408133 129 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 MCFD2P1-201ENST00000417812 300 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RPS15AP10-201ENST00000432472 382 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AL513043.1-201ENST00000439124 535 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RPL9P9-202ENST00000466501 579 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 HMGN2P13-201ENST00000476476 274 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RNA5SP217-201ENST00000515959 91 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 RN7SKP57-201ENST00000517248 293 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms