Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AL645944.1-201ENST00000603857 493 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-6P-201ENST00000606623 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AL157817.1-201ENST00000614264 790 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC010205.1-201ENST00000616668 449 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC007256.1-201ENST00000392253 2765 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SLC44A4Q53GD3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 RPL7P10-201ENST00000417407 739 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AL158071.1-201ENST00000430315 461 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 FTH1P25-201ENST00000447665 469 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 RNU7-138P-201ENST00000459479 64 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 RNU6-988P-201ENST00000519081 107 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 HMGN2P15-201ENST00000585707 270 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 MIR6128-201ENST00000615528 109 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AC091925.1-201ENST00000623204 462 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AC138627.2-201ENST00000624202 601 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 AL669831.3-213ENST00000636676 183 ntBASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A4Q53GD3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.5-201ENST00000362334 102 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RNU6-562P-201ENST00000362731 107 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RNU6-898P-201ENST00000365627 104 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RNU6-463P-201ENST00000384340 107 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AL360182.1-201ENST00000397433 468 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 MIR888-201ENST00000401186 77 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RPL26P27-201ENST00000414397 437 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AL358176.2-201ENST00000425769 204 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 IPO7P1-201ENST00000442031 636 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RPL26P9-201ENST00000457466 433 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 MTND5P22-201ENST00000458380 195 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC006445.1-201ENST00000491925 405 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 RN7SKP295-201ENST00000517264 153 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC087854.1-201ENST00000519706 414 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AP006245.1-201ENST00000522549 120 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AL355598.1-201ENST00000604169 202 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 PLCE1P1-201ENST00000622094 305 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 AC092608.2-201ENST00000624427 218 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A4Q53GD3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.112-201ENST00000363250 102 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC093151.1-201ENST00000427711 313 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AL359672.1-201ENST00000442302 409 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 RPL37P4-201ENST00000448908 268 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC097462.2-201ENST00000504623 481 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC079140.5-201ENST00000507882 310 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC092436.3-201ENST00000511788 257 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC069113.1-201ENST00000517763 267 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC022080.3-201ENST00000544433 482 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 OR1M4P-201ENST00000589199 287 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 ELOCP5-201ENST00000604924 333 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AL132822.1-201ENST00000617063 513 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC010378.1-201ENST00000619270 362 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC098657.3-201ENST00000620434 263 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 7SK.10-201ENST00000621414 298 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AL078596.1-201ENST00000624856 447 ntBASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms