Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ATG3P1-201ENST00000419507 911 ntBASIC2.55□□□□□ -2
CDH11P55287 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.55□□□□□ -2
CDH11P55287 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.55□□□□□ -2
CDH11P55287 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
CDH11P55287 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.55□□□□□ -2
CDH11P55287 IFNA20P-201ENST00000436840 528 ntBASIC2.55□□□□□ -2
CDH11P55287 HIGD1AP2-201ENST00000446367 280 ntBASIC2.55□□□□□ -2
CDH11P55287 MRPL50P4-201ENST00000446432 475 ntBASIC2.55□□□□□ -2
CDH11P55287 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.55□□□□□ -2
CDH11P55287 AC013470.1-201ENST00000453438 462 ntBASIC2.55□□□□□ -2
CDH11P55287 PMCHL2-203ENST00000457791 237 ntBASIC2.55□□□□□ -2
CDH11P55287 RNU7-138P-201ENST00000459479 64 ntBASIC2.55□□□□□ -2
CDH11P55287 RNU6-329P-201ENST00000459618 107 ntBASIC2.55□□□□□ -2
CDH11P55287 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
CDH11P55287 RPS27P26-201ENST00000494583 239 ntBASIC2.55□□□□□ -2
CDH11P55287 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.55□□□□□ -2
CDH11P55287 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
CDH11P55287 RNU6-864P-201ENST00000516256 108 ntBASIC2.55□□□□□ -2
CDH11P55287 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.55□□□□□ -2
CDH11P55287 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.55□□□□□ -2
CDH11P55287 AP005597.4-201ENST00000526762 229 ntBASIC2.55□□□□□ -2
CDH11P55287 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.55□□□□□ -2
CDH11P55287 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.55□□□□□ -2
CDH11P55287 AC025281.1-201ENST00000567026 265 ntBASIC2.55□□□□□ -2
CDH11P55287 MIR3672-201ENST00000584290 82 ntBASIC2.55□□□□□ -2
CDH11P55287 AC005046.1-201ENST00000608515 625 ntBASIC2.55□□□□□ -2
CDH11P55287 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.55□□□□□ -2
CDH11P55287 AC092794.2-201ENST00000620933 563 ntBASIC2.55□□□□□ -2
CDH11P55287 AC009033.1-201ENST00000624279 431 ntBASIC2.55□□□□□ -2
CDH11P55287 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
CDH11P55287 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
CDH11P55287 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
CDH11P55287 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
CDH11P55287 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDH11P55287 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.54□□□□□ -2
CDH11P55287 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.54□□□□□ -2
CDH11P55287 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-845P-201ENST00000362578 103 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-37P-201ENST00000362692 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-11P-201ENST00000364234 107 ntBASIC2.54□□□□□ -2
CDH11P55287 Y_RNA.301-201ENST00000364990 103 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-25P-201ENST00000383873 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-1-201ENST00000383898 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-1027P-201ENST00000383998 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-48P-201ENST00000384161 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-36P-201ENST00000384172 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-4P-201ENST00000384205 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-5P-201ENST00000384238 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-3P-201ENST00000384314 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-16P-201ENST00000384385 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-15P-201ENST00000384534 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-851P-201ENST00000384565 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-2-201ENST00000384627 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-29P-201ENST00000384637 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-9-201ENST00000384776 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-33P-201ENST00000384793 107 ntBASIC2.54□□□□□ -2
CDH11P55287 RAP1BP3-201ENST00000407180 549 ntBASIC2.54□□□□□ -2
CDH11P55287 AC009161.1-201ENST00000417306 376 ntBASIC2.54□□□□□ -2
CDH11P55287 PDCL2P1-201ENST00000419302 352 ntBASIC2.54□□□□□ -2
CDH11P55287 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.54□□□□□ -2
CDH11P55287 AC236972.1-201ENST00000433225 199 ntBASIC2.54□□□□□ -2
CDH11P55287 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.54□□□□□ -2
CDH11P55287 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
CDH11P55287 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.54□□□□□ -2
CDH11P55287 MTND4P18-201ENST00000447010 465 ntBASIC2.54□□□□□ -2
CDH11P55287 MTND3P10-201ENST00000450967 341 ntBASIC2.54□□□□□ -2
CDH11P55287 AC092001.1-201ENST00000453012 261 ntBASIC2.54□□□□□ -2
CDH11P55287 UBE2DNL-203ENST00000474922 222 ntBASIC2.54□□□□□ -2
CDH11P55287 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDH11P55287 AC116655.1-201ENST00000508324 901 ntBASIC2.54□□□□□ -2
CDH11P55287 MTCYBP40-201ENST00000509390 1135 ntBASIC2.54□□□□□ -2
CDH11P55287 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
CDH11P55287 AC113155.1-201ENST00000511141 769 ntBASIC2.54□□□□□ -2
CDH11P55287 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU4-49P-201ENST00000516080 140 ntBASIC2.54□□□□□ -2
CDH11P55287 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
CDH11P55287 RN7SKP256-201ENST00000517201 314 ntBASIC2.54□□□□□ -2
CDH11P55287 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDH11P55287 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.54□□□□□ -2
CDH11P55287 COPS8P3-201ENST00000526024 482 ntBASIC2.54□□□□□ -2
CDH11P55287 AL121821.2-201ENST00000556081 394 ntBASIC2.54□□□□□ -2
CDH11P55287 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.54□□□□□ -2
CDH11P55287 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.54□□□□□ -2
CDH11P55287 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.54□□□□□ -2
CDH11P55287 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDH11P55287 AC011712.1-201ENST00000588959 234 ntBASIC2.54□□□□□ -2
CDH11P55287 AC091152.3-201ENST00000604227 325 ntBASIC2.54□□□□□ -2
CDH11P55287 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
CDH11P55287 RNU6-6P-201ENST00000606623 107 ntBASIC2.54□□□□□ -2
CDH11P55287 SCARNA4-202ENST00000625402 129 ntBASIC2.54□□□□□ -2
CDH11P55287 MIR3199-2-201ENST00000636243 86 ntBASIC2.54□□□□□ -2
CDH11P55287 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDH11P55287 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
CDH11P55287 AC010889.1-201ENST00000566193 2666 ntBASIC2.53□□□□□ -2
CDH11P55287 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDH11P55287 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.53□□□□□ -2
CDH11P55287 Y_RNA.135-201ENST00000363439 95 ntBASIC2.53□□□□□ -2
CDH11P55287 Y_RNA.166-201ENST00000363730 102 ntBASIC2.53□□□□□ -2
CDH11P55287 Y_RNA.212-201ENST00000364177 102 ntBASIC2.53□□□□□ -2
CDH11P55287 RNU6-767P-201ENST00000384132 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 421.9 ms