Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
XPAP23025 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.58□□□□□ -1.84
XPAP23025 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.58□□□□□ -1.84
XPAP23025 SNORD50.1-201ENST00000362987 71 ntBASIC3.58□□□□□ -1.84
XPAP23025 Y_RNA.144-201ENST00000363521 113 ntBASIC3.58□□□□□ -1.84
XPAP23025 Y_RNA.314-201ENST00000365114 102 ntBASIC3.58□□□□□ -1.84
XPAP23025 RNU1-115P-201ENST00000365329 160 ntBASIC3.58□□□□□ -1.84
XPAP23025 MIR568-201ENST00000385036 95 ntBASIC3.58□□□□□ -1.84
XPAP23025 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
XPAP23025 MIR888-201ENST00000401186 77 ntBASIC3.58□□□□□ -1.84
XPAP23025 RPS29P13-201ENST00000402041 169 ntBASIC3.58□□□□□ -1.84
XPAP23025 RNU6-1156P-201ENST00000410365 100 ntBASIC3.58□□□□□ -1.84
XPAP23025 AC006989.1-201ENST00000427212 131 ntBASIC3.58□□□□□ -1.84
XPAP23025 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.58□□□□□ -1.84
XPAP23025 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.58□□□□□ -1.84
XPAP23025 BTF3P15-201ENST00000455606 336 ntBASIC3.58□□□□□ -1.84
XPAP23025 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.58□□□□□ -1.84
XPAP23025 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
XPAP23025 RNU2-27P-201ENST00000516185 142 ntBASIC3.58□□□□□ -1.84
XPAP23025 SNORA43.2-201ENST00000516652 128 ntBASIC3.58□□□□□ -1.84
XPAP23025 SNORA70.18-201ENST00000516696 98 ntBASIC3.58□□□□□ -1.84
XPAP23025 AP000889.1-201ENST00000530968 660 ntBASIC3.58□□□□□ -1.84
XPAP23025 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.58□□□□□ -1.84
XPAP23025 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.58□□□□□ -1.84
XPAP23025 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
XPAP23025 AC024220.1-201ENST00000603675 484 ntBASIC3.58□□□□□ -1.84
XPAP23025 MIR8076-201ENST00000611401 83 ntBASIC3.58□□□□□ -1.84
XPAP23025 SCARNA4-202ENST00000625402 129 ntBASIC3.58□□□□□ -1.84
XPAP23025 AC005592.1-201ENST00000566527 1640 ntBASIC3.58□□□□□ -1.84
XPAP23025 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
XPAP23025 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
XPAP23025 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
XPAP23025 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
XPAP23025 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
XPAP23025 AC007656.2-201ENST00000624902 4547 ntBASIC3.57□□□□□ -1.84
XPAP23025 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XPAP23025 SNORA71.3-201ENST00000362582 128 ntBASIC3.57□□□□□ -1.84
XPAP23025 RNU6-105P-201ENST00000363909 104 ntBASIC3.57□□□□□ -1.84
XPAP23025 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
XPAP23025 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
XPAP23025 SAR1AP2-201ENST00000392696 594 ntBASIC3.57□□□□□ -1.84
XPAP23025 RNU2-23P-201ENST00000410545 195 ntBASIC3.57□□□□□ -1.84
XPAP23025 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 CYCSP4-201ENST00000429682 331 ntBASIC3.57□□□□□ -1.84
XPAP23025 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 RPL23AP14-201ENST00000468281 468 ntBASIC3.57□□□□□ -1.84
XPAP23025 RPL7P49-201ENST00000471402 708 ntBASIC3.57□□□□□ -1.84
XPAP23025 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XPAP23025 MIR3186-201ENST00000577404 85 ntBASIC3.57□□□□□ -1.84
XPAP23025 MIR5696-201ENST00000578474 85 ntBASIC3.57□□□□□ -1.84
XPAP23025 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.57□□□□□ -1.84
XPAP23025 AL078596.1-201ENST00000624856 447 ntBASIC3.57□□□□□ -1.84
XPAP23025 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.57□□□□□ -1.84
XPAP23025 SNORA50A-202ENST00000629536 136 ntBASIC3.57□□□□□ -1.84
XPAP23025 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
XPAP23025 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
XPAP23025 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
XPAP23025 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
XPAP23025 RNA5SP119-201ENST00000362715 117 ntBASIC3.56□□□□□ -1.84
XPAP23025 RNU6-450P-201ENST00000364654 107 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR548F4-201ENST00000408515 105 ntBASIC3.56□□□□□ -1.84
XPAP23025 HMGB3P2-201ENST00000411913 584 ntBASIC3.56□□□□□ -1.84
XPAP23025 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
XPAP23025 AC099799.1-201ENST00000439809 192 ntBASIC3.56□□□□□ -1.84
XPAP23025 RPL37P4-201ENST00000448908 268 ntBASIC3.56□□□□□ -1.84
XPAP23025 AC034236.1-201ENST00000469891 373 ntBASIC3.56□□□□□ -1.84
XPAP23025 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.56□□□□□ -1.84
XPAP23025 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
XPAP23025 AC116655.1-201ENST00000508324 901 ntBASIC3.56□□□□□ -1.84
XPAP23025 AL117187.1-201ENST00000555482 181 ntBASIC3.56□□□□□ -1.84
XPAP23025 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.56□□□□□ -1.84
XPAP23025 AL391261.3-201ENST00000557194 520 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR3922-201ENST00000585192 84 ntBASIC3.56□□□□□ -1.84
XPAP23025 AL451007.1-201ENST00000595491 289 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR1244-1-201ENST00000612829 85 ntBASIC3.56□□□□□ -1.84
XPAP23025 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR6134-201ENST00000617606 109 ntBASIC3.56□□□□□ -1.84
XPAP23025 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.56□□□□□ -1.84
XPAP23025 AL606534.2-204ENST00000635008 178 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR1244-3-201ENST00000635744 85 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR1244-2-201ENST00000636449 85 ntBASIC3.56□□□□□ -1.84
XPAP23025 MIR1244-4-202ENST00000636813 85 ntBASIC3.56□□□□□ -1.84
XPAP23025 AC022336.2-201ENST00000568966 2538 ntBASIC3.56□□□□□ -1.84
XPAP23025 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
XPAP23025 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
XPAP23025 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.56□□□□□ -1.84
XPAP23025 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
XPAP23025 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
XPAP23025 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.55□□□□□ -1.84
XPAP23025 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
XPAP23025 RNU1-100P-201ENST00000365255 165 ntBASIC3.55□□□□□ -1.84
XPAP23025 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 Y_RNA.557-201ENST00000384680 107 ntBASIC3.55□□□□□ -1.84
XPAP23025 Y_RNA.577-201ENST00000384794 101 ntBASIC3.55□□□□□ -1.84
XPAP23025 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.55□□□□□ -1.84
XPAP23025 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms