Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC022616.8-201ENST00000533569 253 ntBASIC0.1□□□□□ -2.39
LTN1O94822 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.1□□□□□ -2.39
LTN1O94822 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.1□□□□□ -2.39
LTN1O94822 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.1□□□□□ -2.39
LTN1O94822 AC104465.1-201ENST00000611365 139 ntBASIC0.1□□□□□ -2.39
LTN1O94822 AC245060.5-201ENST00000610778 3293 ntBASIC0.1□□□□□ -2.39
LTN1O94822 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
LTN1O94822 Y_RNA.170-201ENST00000363746 110 ntBASIC0.09□□□□□ -2.39
LTN1O94822 AL356776.1-201ENST00000406574 447 ntBASIC0.09□□□□□ -2.39
LTN1O94822 PTGES3P4-201ENST00000426243 356 ntBASIC0.09□□□□□ -2.39
LTN1O94822 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
LTN1O94822 TIMM9P1-201ENST00000436122 256 ntBASIC0.09□□□□□ -2.39
LTN1O94822 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.09□□□□□ -2.39
LTN1O94822 PDCD5P2-201ENST00000507570 312 ntBASIC0.09□□□□□ -2.39
LTN1O94822 AC113398.2-201ENST00000507630 558 ntBASIC0.09□□□□□ -2.39
LTN1O94822 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.39
LTN1O94822 AP001180.6-201ENST00000584918 159 ntBASIC0.09□□□□□ -2.39
LTN1O94822 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.09□□□□□ -2.39
LTN1O94822 AC023934.1-201ENST00000574529 2389 ntBASIC0.09□□□□□ -2.39
LTN1O94822 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
LTN1O94822 RNU6-439P-201ENST00000384188 106 ntBASIC0.09□□□□□ -2.4
LTN1O94822 MIR135A2-201ENST00000384854 100 ntBASIC0.09□□□□□ -2.4
LTN1O94822 MIR1302-8-201ENST00000408342 128 ntBASIC0.09□□□□□ -2.4
LTN1O94822 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
LTN1O94822 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.09□□□□□ -2.4
LTN1O94822 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.09□□□□□ -2.4
LTN1O94822 AL353691.1-201ENST00000451332 387 ntBASIC0.09□□□□□ -2.4
LTN1O94822 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.4
LTN1O94822 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.09□□□□□ -2.4
LTN1O94822 HMGB1P51-201ENST00000605166 638 ntBASIC0.09□□□□□ -2.4
LTN1O94822 AL365434.2-201ENST00000607979 234 ntBASIC0.09□□□□□ -2.4
LTN1O94822 U2.21-201ENST00000637295 81 ntBASIC0.09□□□□□ -2.4
LTN1O94822 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.4
LTN1O94822 AL391994.1-201ENST00000254724 282 ntBASIC0.08□□□□□ -2.4
LTN1O94822 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LTN1O94822 MIR597-201ENST00000384968 97 ntBASIC0.08□□□□□ -2.4
LTN1O94822 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.08□□□□□ -2.4
LTN1O94822 RPEP5-201ENST00000441137 268 ntBASIC0.08□□□□□ -2.4
LTN1O94822 CYCTP-201ENST00000504253 315 ntBASIC0.08□□□□□ -2.4
LTN1O94822 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.08□□□□□ -2.4
LTN1O94822 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.08□□□□□ -2.4
LTN1O94822 EIF1P4-201ENST00000572664 335 ntBASIC0.08□□□□□ -2.4
LTN1O94822 RPL30P11-203ENST00000598995 310 ntBASIC0.08□□□□□ -2.4
LTN1O94822 RNU4-73P-201ENST00000363164 141 ntBASIC0.07□□□□□ -2.4
LTN1O94822 RNU6-923P-201ENST00000364753 107 ntBASIC0.07□□□□□ -2.4
LTN1O94822 MIR649-201ENST00000384843 97 ntBASIC0.07□□□□□ -2.4
LTN1O94822 CETN4P-201ENST00000432407 469 ntBASIC0.07□□□□□ -2.4
LTN1O94822 UBE2V1P8-201ENST00000437166 265 ntBASIC0.07□□□□□ -2.4
LTN1O94822 RNVU1-2-201ENST00000516326 135 ntBASIC0.07□□□□□ -2.4
LTN1O94822 AC109329.1-201ENST00000518744 317 ntBASIC0.07□□□□□ -2.4
LTN1O94822 MIR3167-201ENST00000579623 85 ntBASIC0.07□□□□□ -2.4
LTN1O94822 AL583856.2-201ENST00000606298 543 ntBASIC0.07□□□□□ -2.4
LTN1O94822 uc_338.15-201ENST00000615470 191 ntBASIC0.07□□□□□ -2.4
LTN1O94822 AC240442.1-201ENST00000616055 283 ntBASIC0.07□□□□□ -2.4
LTN1O94822 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.07□□□□□ -2.4
LTN1O94822 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.07□□□□□ -2.4
LTN1O94822 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
LTN1O94822 Y_RNA.185-201ENST00000363894 100 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.06□□□□□ -2.4
LTN1O94822 RAB11AP1-201ENST00000442978 646 ntBASIC0.06□□□□□ -2.4
LTN1O94822 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.06□□□□□ -2.4
LTN1O94822 RNA5SP255-201ENST00000516370 107 ntBASIC0.06□□□□□ -2.4
LTN1O94822 RNA5SP168-201ENST00000516642 112 ntBASIC0.06□□□□□ -2.4
LTN1O94822 ARL2BPP5-201ENST00000523141 481 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.06□□□□□ -2.4
LTN1O94822 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.06□□□□□ -2.4
LTN1O94822 AC108676.2-201ENST00000605225 163 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AP000860.1-201ENST00000605250 559 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AC105129.3-201ENST00000605455 485 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AL355802.4-201ENST00000607635 548 ntBASIC0.06□□□□□ -2.4
LTN1O94822 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.06□□□□□ -2.4
LTN1O94822 RPL37P21-201ENST00000435890 276 ntBASIC0.06□□□□□ -2.4
LTN1O94822 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.06□□□□□ -2.4
LTN1O94822 AC118282.2-201ENST00000508739 374 ntBASIC0.06□□□□□ -2.4
LTN1O94822 RNA5SP291-201ENST00000517222 105 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AC007834.2-201ENST00000536310 343 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.06□□□□□ -2.4
LTN1O94822 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.06□□□□□ -2.4
LTN1O94822 AC012557.2-201ENST00000605919 418 ntBASIC0.06□□□□□ -2.4
LTN1O94822 AL158163.2-201ENST00000619110 700 ntBASIC0.06□□□□□ -2.4
LTN1O94822 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.06□□□□□ -2.4
LTN1O94822 SNORD95.1-201ENST00000364099 68 ntBASIC0.05□□□□□ -2.4
LTN1O94822 RNU6-1327P-201ENST00000365302 105 ntBASIC0.05□□□□□ -2.4
LTN1O94822 RNU2-15P-201ENST00000410692 191 ntBASIC0.05□□□□□ -2.4
LTN1O94822 PNRC2P1-201ENST00000423940 420 ntBASIC0.05□□□□□ -2.4
LTN1O94822 SNX2P2-201ENST00000424553 323 ntBASIC0.05□□□□□ -2.4
LTN1O94822 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.05□□□□□ -2.4
LTN1O94822 AC025459.1-201ENST00000504072 156 ntBASIC0.05□□□□□ -2.4
LTN1O94822 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.05□□□□□ -2.4
LTN1O94822 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.05□□□□□ -2.4
LTN1O94822 Z82243.1-201ENST00000609432 473 ntBASIC0.05□□□□□ -2.4
LTN1O94822 AC024257.5-201ENST00000612739 531 ntBASIC0.05□□□□□ -2.4
LTN1O94822 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.05□□□□□ -2.4
LTN1O94822 Pinc.1-201ENST00000616452 154 ntBASIC0.05□□□□□ -2.4
LTN1O94822 PCMTD1P7-201ENST00000634506 357 ntBASIC0.05□□□□□ -2.4
LTN1O94822 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.05□□□□□ -2.4
LTN1O94822 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
LTN1O94822 SNORA8.3-201ENST00000384679 139 ntBASIC0.04□□□□□ -2.4
LTN1O94822 Y_RNA.571-201ENST00000384753 98 ntBASIC0.04□□□□□ -2.4
LTN1O94822 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms