Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.25□□□□□ -2.37
HMGN4O00479 AC009269.6-201ENST00000621778 588 ntBASIC0.25□□□□□ -2.37
HMGN4O00479 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN4O00479 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN4O00479 MIR548B-201ENST00000385247 97 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
HMGN4O00479 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN4O00479 EBAG9P1-201ENST00000418955 543 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 SNRPGP9-201ENST00000456025 225 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 RNA5SP269-201ENST00000459032 137 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.24□□□□□ -2.37
HMGN4O00479 AC013828.1-201ENST00000481845 158 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN4O00479 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN4O00479 RNA5SP168-201ENST00000516642 112 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 MIR5094-201ENST00000578766 85 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 AC009237.15-201ENST00000610252 501 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 AC130324.3-201ENST00000614165 542 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 AC068647.2-201ENST00000637380 353 ntBASIC0.24□□□□□ -2.37
HMGN4O00479 RNU6-944P-201ENST00000364023 107 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 RNU6-743P-201ENST00000364151 106 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 Y_RNA.548-201ENST00000384656 105 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 MIR186-201ENST00000384988 86 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 GPM6BP2-201ENST00000432046 144 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 CETN4P-201ENST00000432407 469 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN4O00479 GPM6BP1-201ENST00000446387 144 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN4O00479 FABP5P15-201ENST00000453566 214 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN4O00479 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN4O00479 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.23□□□□□ -2.37
HMGN4O00479 RNU6-965P-201ENST00000516721 96 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 RN7SKP256-201ENST00000517201 314 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 NIFKP8-201ENST00000560500 874 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AL161798.1-201ENST00000604630 131 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 uc_338.15-201ENST00000615470 191 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AC018926.1-201ENST00000616335 435 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AC093648.1-201ENST00000623546 606 ntBASIC0.23□□□□□ -2.37
HMGN4O00479 AC134026.1-201ENST00000623249 2239 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 RNU6-1010P-201ENST00000362757 107 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 SNORD114-6-201ENST00000364393 72 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 MIR520A-201ENST00000384862 85 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 TAF13P2-201ENST00000416876 286 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGN4O00479 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
HMGN4O00479 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.22□□□□□ -2.37
HMGN4O00479 AL358794.1-201ENST00000445689 381 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGN4O00479 RNU6-1132P-201ENST00000459214 107 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 MTND5P13-201ENST00000513046 1079 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 AC018659.1-201ENST00000551083 169 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
HMGN4O00479 AP001596.2-201ENST00000608410 312 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
HMGN4O00479 AC013470.4-201ENST00000619978 986 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.22□□□□□ -2.37
HMGN4O00479 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
HMGN4O00479 RNU6-40P-201ENST00000384254 107 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 MIR200A-201ENST00000384875 90 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 MIR194-1-201ENST00000384892 85 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 DHFRP6-201ENST00000401776 268 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN4O00479 AC063976.4-201ENST00000421971 163 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 ISCA1P1-201ENST00000426679 387 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.21□□□□□ -2.38
HMGN4O00479 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN4O00479 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.21□□□□□ -2.38
HMGN4O00479 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN4O00479 MTCO2P25-201ENST00000447065 681 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN4O00479 RPL30P6-201ENST00000475925 342 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC023194.1-201ENST00000493084 308 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.21□□□□□ -2.38
HMGN4O00479 AC104806.1-201ENST00000508720 308 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN4O00479 AC087897.1-201ENST00000550134 156 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC025423.5-201ENST00000550230 219 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 HMGB1P33-201ENST00000563485 527 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC090615.1-201ENST00000577519 154 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AL353997.4-201ENST00000586196 166 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
HMGN4O00479 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
HMGN4O00479 AL391994.1-201ENST00000254724 282 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 Y_RNA.124-201ENST00000363339 93 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 RNU6-529P-201ENST00000363383 104 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 RNU6-1078P-201ENST00000364522 103 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 SNORA27.3-201ENST00000364937 134 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.2□□□□□ -2.38
HMGN4O00479 SNORD12-201ENST00000391002 90 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 RNU2-7P-201ENST00000410794 178 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HMGN4O00479 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN4O00479 USP9YP22-201ENST00000438971 294 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN4O00479 MTND5P8-201ENST00000449817 1083 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 AC002350.1-201ENST00000490759 375 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 RNA5SP437-201ENST00000517249 129 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms