Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC093259.1-201ENST00000509755 300 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC009646.1-201ENST00000510455 318 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 RNA5SP200-201ENST00000516360 103 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC115990.1-201ENST00000526957 301 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 OR11H5P-201ENST00000554039 926 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC007375.1-201ENST00000554513 578 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 MIR5195-201ENST00000583555 115 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC093424.1-201ENST00000604999 338 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC096577.2-201ENST00000611455 153 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 MIR1248-201ENST00000629190 106 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AC062016.1-201ENST00000355719 319 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 MIR128-1-201ENST00000384921 82 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RNA5SP489-201ENST00000410986 109 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RNA5SP501-201ENST00000410990 112 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 HMGN1P14-201ENST00000412459 517 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AC009963.1-201ENST00000417265 157 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 ISCA1P6-201ENST00000427740 390 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AL451074.3-201ENST00000437709 472 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RPL32P28-201ENST00000443577 397 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AL033528.1-201ENST00000453780 140 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RNA5SP57-201ENST00000459463 123 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 ANXA2P1-201ENST00000505539 926 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RN7SKP287-201ENST00000516546 266 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RNU6-759P-201ENST00000516740 103 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 GNAI2P1-201ENST00000541815 315 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 CYP2C61P-201ENST00000604072 290 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AP001506.1-201ENST00000615444 211 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 DUXAP9-208ENST00000622815 614 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 AC110994.2-201ENST00000635481 492 ntBASIC1.48□□□□□ -2.17
SMKR1H3BMG3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SMKR1H3BMG3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 RNU6-105P-201ENST00000363909 104 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 SNORA62.1-201ENST00000364287 154 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 RNU6-74P-201ENST00000384235 107 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MIR454-201ENST00000390180 115 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 SNORA40.3-201ENST00000390964 122 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 SUMO2P12-201ENST00000405924 140 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 RNU6-195P-201ENST00000411352 109 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MTND3P17-201ENST00000416968 344 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC079448.1-201ENST00000449377 373 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MIR1254-2-201ENST00000579553 63 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MIR4775-201ENST00000581168 75 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 SNRPGP19-201ENST00000603826 189 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC007179.3-201ENST00000604976 235 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC018889.1-201ENST00000605372 397 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AL360219.1-201ENST00000610230 366 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC099842.1-201ENST00000619919 596 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AC097372.5-201ENST00000623665 376 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
SMKR1H3BMG3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMKR1H3BMG3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-715P-201ENST00000365204 103 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-108P-201ENST00000365558 107 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 MIR1294-201ENST00000408503 142 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms