Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 MIR4782-201ENST00000577987 79 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC012493.2-201ENST00000595083 291 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AL161629.2-201ENST00000615347 275 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC007485.1-201ENST00000616755 206 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC027309.3-201ENST00000623419 351 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AL078596.1-201ENST00000624856 447 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC008725.1-201ENST00000605123 2263 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-1317P-201ENST00000364582 104 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.364-201ENST00000365532 101 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNY1P14-201ENST00000384426 108 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR23B-201ENST00000384832 97 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC096664.2-201ENST00000411843 406 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC113618.1-201ENST00000416747 285 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC243428.1-201ENST00000421099 264 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 TMEM167AP1-201ENST00000423409 219 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 BX276092.3-201ENST00000424182 230 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC006946.1-201ENST00000429106 328 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RPS6P12-201ENST00000432491 726 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RPS29P6-201ENST00000438196 145 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 HMGB1P12-201ENST00000438594 598 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL12P25-201ENST00000455592 494 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 SNRPGP5-201ENST00000456003 220 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 U8.21-201ENST00000459536 136 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC133134.1-201ENST00000466800 359 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RPS4XP13-201ENST00000483219 789 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-120P-201ENST00000516077 103 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-703P-201ENST00000516946 107 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 HMGB1P14-201ENST00000557424 591 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC024220.1-201ENST00000603675 484 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AL355598.1-201ENST00000604169 202 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AC012468.1-201ENST00000604888 430 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 AL110115.1-201ENST00000614396 364 ntBASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV5S1A1TA0A578 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU1-115P-201ENST00000365329 160 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 U8.8-201ENST00000365399 135 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-985P-201ENST00000410182 104 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AL117339.3-201ENST00000418733 162 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 YPEL5P1-201ENST00000419731 367 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AC099799.1-201ENST00000439809 192 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MTATP6P7-201ENST00000453315 681 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL7P49-201ENST00000471402 708 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AC015911.1-201ENST00000495111 156 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AK3P2-201ENST00000507976 429 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-377P-201ENST00000515965 102 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU1-61P-201ENST00000516107 151 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-1137P-201ENST00000517073 99 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 SUB1P3-201ENST00000564581 315 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR4680-201ENST00000580906 66 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AC009314.1-201ENST00000603871 304 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 AC007179.3-201ENST00000604976 235 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR3976-201ENST00000606807 139 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR92B-201ENST00000607575 96 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 ZNF807-201ENST00000328088 1707 ntBASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV5S1A1TA0A578 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU5E-7P-201ENST00000365290 117 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.496-201ENST00000384444 101 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 GSTA11P-201ENST00000452866 669 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC013470.1-201ENST00000453438 462 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU7-170P-201ENST00000459303 61 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 snoU109.2-201ENST00000459316 135 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms