Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC134698.4-201ENST00000523451 826 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AF235103.2-201ENST00000525753 346 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 CENPUP1-201ENST00000526649 1202 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC023050.3-201ENST00000541142 333 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 VN1R80P-201ENST00000597126 338 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC006504.8-201ENST00000621046 635 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC009033.1-201ENST00000624279 431 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 U2.21-201ENST00000637295 81 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU6-778P-201ENST00000363269 103 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.160-201ENST00000363677 92 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU6-384P-201ENST00000364900 104 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU1-73P-201ENST00000383971 164 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 SNORA32.2-201ENST00000384049 122 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU6-198P-201ENST00000384258 104 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNY3P14-201ENST00000384309 102 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU6-434P-201ENST00000384376 107 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 MT-TL1-201ENST00000386347 75 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AL122016.1-201ENST00000403365 367 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AL138885.1-201ENST00000405921 675 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU4-26P-201ENST00000410270 107 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 POLHP1-201ENST00000411806 470 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 SRIP2-201ENST00000428470 166 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RPL26P9-201ENST00000457466 433 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 RPS27AP10-201ENST00000496103 208 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 BTF3P12-201ENST00000519620 469 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 OR11H5P-201ENST00000554039 926 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC103810.1-201ENST00000579873 453 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 MIR5692A1-201ENST00000580523 69 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC002044.1-201ENST00000606707 158 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC135507.2-201ENST00000612443 309 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC022418.1-201ENST00000624118 445 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.44□□□□□ -2.02
NDE1Q9NXR1 AC099654.14-201ENST00000638599 341 ntBASIC2.44□□□□□ -2.02
NDE1Q9NXR1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 RNU6-166P-201ENST00000384371 107 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 SNORA40C-201ENST00000391285 128 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MIR888-201ENST00000401186 77 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 RNU2-3P-201ENST00000410144 191 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 PGBD4P6-201ENST00000421501 610 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC098614.2-201ENST00000426040 255 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MTATP6P23-201ENST00000440153 476 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MTND4P18-201ENST00000447010 465 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC092798.1-201ENST00000458542 409 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MTCO2P30-201ENST00000503662 364 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC074344.1-201ENST00000512823 224 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC104136.1-201ENST00000512969 394 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 LRRC34P2-201ENST00000514850 553 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 SNORA31.21-201ENST00000517180 77 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AC090115.3-201ENST00000553218 849 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MIR548S-201ENST00000581352 82 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 BNIP3P25-201ENST00000596023 559 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 BNIP3P10-201ENST00000605360 577 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AL121757.2-201ENST00000611223 313 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 U2.17-201ENST00000611454 95 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 AL136221.1-201ENST00000621449 509 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 MIR6852-201ENST00000621699 66 ntBASIC2.43□□□□□ -2.02
NDE1Q9NXR1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.43□□□□□ -2.02
NDE1Q9NXR1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC022336.2-201ENST00000568966 2538 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MIR422A-201ENST00000362286 90 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 SNORD14B-201ENST00000364533 90 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 Z98749.2-208ENST00000381646 500 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 SNORA41-201ENST00000384675 132 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MIR10A-201ENST00000385043 110 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MIR9-1-201ENST00000385198 89 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNU6-373P-201ENST00000411247 98 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms