Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RPL32P28-201ENST00000443577 397 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 HMGN2P9-201ENST00000476875 229 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC010587.2-201ENST00000511727 448 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 HSPE1P18-201ENST00000517602 280 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC010376.1-201ENST00000522101 334 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AP001646.1-201ENST00000527936 915 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC068587.4-201ENST00000533893 186 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC023050.2-201ENST00000544968 387 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AL512310.8-201ENST00000550183 120 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AL021368.1-201ENST00000607490 540 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-1192P-201ENST00000612197 107 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-489P-201ENST00000618289 107 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AP002782.1-201ENST00000623107 614 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL391516.1-201ENST00000554380 2449 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 SNORA63D-201ENST00000364359 132 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MIR520A-201ENST00000384862 85 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MIR554-201ENST00000384874 96 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MIR9-3-201ENST00000385084 90 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 SNORA12-201ENST00000391162 147 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL356967.1-201ENST00000406305 431 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL135786.1-201ENST00000415892 214 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MTND1P32-201ENST00000433043 938 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL360271.2-201ENST00000447710 161 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 PRSS3P4-201ENST00000453323 162 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC114982.1-201ENST00000469402 321 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MTND2P33-201ENST00000506452 1031 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC104806.1-201ENST00000508720 308 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC010486.1-201ENST00000511793 424 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 RNU1-86P-201ENST00000516108 154 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 SNORA19.3-201ENST00000516165 130 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 RNU1-107P-201ENST00000516617 154 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC107934.1-201ENST00000522215 217 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AK6P1-201ENST00000540219 478 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC123904.2-201ENST00000548059 300 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MIR3937-201ENST00000580135 106 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MIR548AC-201ENST00000585049 88 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MTND3P19-201ENST00000603825 345 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 MZT1P2-201ENST00000604387 248 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL020996.3-201ENST00000606617 222 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AL139022.2-201ENST00000606934 443 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC092106.3-201ENST00000611308 722 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 AC027335.2-201ENST00000624030 375 ntBASIC0.59□□□□□ -2.31
CDC42SE1Q9NRR8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
CDC42SE1Q9NRR8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.59□□□□□ -2.32
CDC42SE1Q9NRR8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CDC42SE1Q9NRR8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 MTND5P35-201ENST00000557537 1720 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-78P-201ENST00000362897 107 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 Y_RNA.465-201ENST00000384293 102 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA12.2-201ENST00000391040 156 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC069282.1-201ENST00000411911 526 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AL354695.1-201ENST00000427935 228 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 FTH1P12-201ENST00000432137 551 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 ART2BP-201ENST00000453501 499 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 S100A11P2-201ENST00000467589 312 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC092436.1-201ENST00000506450 503 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 ATP5EP1-201ENST00000510257 156 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 SAP18P1-201ENST00000512058 390 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 MTND4LP25-201ENST00000570218 163 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 DEFB131E-202ENST00000602581 683 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC008745.1-201ENST00000604064 271 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AL158211.2-201ENST00000607282 395 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC104073.3-201ENST00000610942 955 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 PART1_2.1-201ENST00000612397 250 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms