Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPL21P90-201ENST00000415692 466 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 ATG3P1-201ENST00000419507 911 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC018865.2-201ENST00000423631 129 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AL590632.1-201ENST00000424289 371 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 RPL7P37-201ENST00000425095 738 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AL160004.2-201ENST00000432935 350 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS16Q9H269 AC092798.1-201ENST00000458542 409 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 snoU13.28-201ENST00000459235 104 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS16Q9H269 AC117503.1-201ENST00000472241 394 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC139453.3-201ENST00000493276 369 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 SNORA14.1-201ENST00000516113 141 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS16Q9H269 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS16Q9H269 COX6CP5-201ENST00000527162 228 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MTCO3P23-201ENST00000561363 289 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR4680-201ENST00000580906 66 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR4444-1-201ENST00000581696 74 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR4503-201ENST00000582187 83 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR3941-201ENST00000582572 103 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS16Q9H269 UBL5P2-201ENST00000583788 219 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR4444-2-201ENST00000584390 74 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AL133393.1-201ENST00000603277 287 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR7975-201ENST00000619350 68 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 AC138305.3-201ENST00000624988 240 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 KPNA2P1-201ENST00000458289 1591 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
VPS16Q9H269 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS16Q9H269 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS16Q9H269 AC233263.6-201ENST00000631132 1963 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RNU6-562P-201ENST00000362731 107 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RNU6-884P-201ENST00000363889 107 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS16Q9H269 Y_RNA.473-201ENST00000384333 102 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RNU6-45P-201ENST00000384471 107 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 MIR23B-201ENST00000384832 97 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 MIR548F4-201ENST00000408515 105 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RPL26P27-201ENST00000414397 437 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS16Q9H269 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS16Q9H269 RPLP0P7-201ENST00000416050 667 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC005300.1-201ENST00000428401 373 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS16Q9H269 AL035666.1-201ENST00000446195 348 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 MTATP6P7-201ENST00000453315 681 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC010099.1-201ENST00000455434 375 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS16Q9H269 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS16Q9H269 HMGB1P30-201ENST00000492455 606 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 RNU2-69P-201ENST00000516061 100 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AP000867.2-201ENST00000532468 320 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AL117187.1-201ENST00000555482 181 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS16Q9H269 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS16Q9H269 AC018692.3-201ENST00000623929 123 ntBASIC3.35□□□□□ -1.87
VPS16Q9H269 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS16Q9H269 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS16Q9H269 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS16Q9H269 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS16Q9H269 MIR412-201ENST00000362142 91 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-890P-201ENST00000384121 107 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-196P-201ENST00000384315 107 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-1106P-201ENST00000390845 107 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 SNORA11-201ENST00000408789 128 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-985P-201ENST00000410182 104 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 MCFD2P1-201ENST00000417812 300 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RPL21P40-201ENST00000428586 483 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 YME1L1P1-201ENST00000429435 297 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS16Q9H269 RPL37P4-201ENST00000448908 268 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU7-167P-201ENST00000459160 62 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC091153.1-201ENST00000466297 402 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RN7SL633P-201ENST00000488974 297 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC022493.1-201ENST00000492984 337 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC026801.1-201ENST00000497178 464 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC009901.1-201ENST00000506703 541 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-976P-201ENST00000516086 111 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU1-103P-201ENST00000516502 125 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-1016P-201ENST00000516689 94 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-703P-201ENST00000516946 107 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC009902.1-201ENST00000519351 183 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 NACAP3-201ENST00000552100 481 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 U2.17-201ENST00000611454 95 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC007485.1-201ENST00000616755 206 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms