Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-323P-201ENST00000521915 107 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AL355836.1-201ENST00000555951 870 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AC008962.1-201ENST00000605729 304 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AC034102.8-201ENST00000615146 484 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AC008121.3-201ENST00000618726 433 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AL669831.3-213ENST00000636676 183 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B3Q15393 KPNA2P1-201ENST00000458289 1591 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SF3B3Q15393 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SF3B3Q15393 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B3Q15393 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.61□□□□□ -1.83
SF3B3Q15393 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
SF3B3Q15393 SNORA9.2-201ENST00000365361 133 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 RNU6-639P-201ENST00000384074 107 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 AC087854.1-201ENST00000519706 414 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B3Q15393 AC136443.5-201ENST00000603741 370 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 AP000654.2-201ENST00000605633 586 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 AC133104.2-201ENST00000615272 193 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 MIR6128-201ENST00000615528 109 ntBASIC3.61□□□□□ -1.83
SF3B3Q15393 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.61□□□□□ -1.83
SF3B3Q15393 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B3Q15393 SDAD1P2-201ENST00000441308 2028 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
SF3B3Q15393 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.6□□□□□ -1.83
SF3B3Q15393 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B3Q15393 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.6□□□□□ -1.83
SF3B3Q15393 SNORD3E-201ENST00000362899 217 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RNU6-266P-201ENST00000364225 107 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RNU6-1303P-201ENST00000364841 107 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RNU6-95P-201ENST00000384697 107 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AL513331.1-201ENST00000411908 397 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RPL32P35-201ENST00000415214 394 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.6□□□□□ -1.83
SF3B3Q15393 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AL359672.1-201ENST00000442302 409 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AL360271.2-201ENST00000447710 161 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.6□□□□□ -1.83
SF3B3Q15393 AL109933.2-201ENST00000452651 260 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RPL31P60-201ENST00000478450 367 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RN7SL429P-201ENST00000479090 223 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RN7SL489P-201ENST00000486185 223 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RN7SL327P-201ENST00000488659 223 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.6□□□□□ -1.83
SF3B3Q15393 AC026801.1-201ENST00000497178 464 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC097473.1-201ENST00000508142 408 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.6□□□□□ -1.83
SF3B3Q15393 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.6□□□□□ -1.83
SF3B3Q15393 FAM60BP-201ENST00000578364 658 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC100830.2-201ENST00000581636 240 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC073539.2-201ENST00000597113 165 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC008737.2-201ENST00000599446 118 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC002044.1-201ENST00000606707 158 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 RN7SL853P-201ENST00000617250 223 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SF3B3Q15393 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.6□□□□□ -1.83
SF3B3Q15393 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SF3B3Q15393 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SF3B3Q15393 Y_RNA.5-201ENST00000362334 102 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 RNU6-1115P-201ENST00000362490 106 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 RNU6-1040P-201ENST00000383974 107 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 Y_RNA.480-201ENST00000384364 102 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 RPL21P90-201ENST00000415692 466 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.59□□□□□ -1.83
SF3B3Q15393 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 AC087499.2-201ENST00000432861 149 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 MTND3P2-201ENST00000438452 342 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 AC087588.1-201ENST00000462203 316 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 AC108860.1-201ENST00000484521 383 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.59□□□□□ -1.83
SF3B3Q15393 AC026782.1-201ENST00000512952 449 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 RNU6-976P-201ENST00000516086 111 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 SNRPGP16-201ENST00000533275 226 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.59□□□□□ -1.83
SF3B3Q15393 AC006111.3-201ENST00000622137 383 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 MIR7153-201ENST00000637758 57 ntBASIC3.59□□□□□ -1.83
SF3B3Q15393 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B3Q15393 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SF3B3Q15393 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.59□□□□□ -1.84
SF3B3Q15393 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.59□□□□□ -1.84
SF3B3Q15393 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.59□□□□□ -1.84
SF3B3Q15393 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms