Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC005786.1-201ENST00000588553 154 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AL158827.2-201ENST00000602494 330 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AC006270.3-201ENST00000605967 1036 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AL691447.3-201ENST00000635020 330 ntBASIC1.19□□□□□ -2.22
TPM4P67936 MTND5P42-201ENST00000637720 498 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AC099654.8-201ENST00000637757 681 ntBASIC1.19□□□□□ -2.22
TPM4P67936 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM4P67936 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
TPM4P67936 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
TPM4P67936 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
TPM4P67936 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
TPM4P67936 FCF1P10-201ENST00000407590 479 ntBASIC1.18□□□□□ -2.22
TPM4P67936 MTND4P3-201ENST00000417829 541 ntBASIC1.18□□□□□ -2.22
TPM4P67936 OOSP1P1-201ENST00000423265 274 ntBASIC1.18□□□□□ -2.22
TPM4P67936 AC027119.1-201ENST00000440877 241 ntBASIC1.18□□□□□ -2.22
TPM4P67936 RPL23AP76-201ENST00000441860 458 ntBASIC1.18□□□□□ -2.22
TPM4P67936 USP9YP17-201ENST00000444617 696 ntBASIC1.18□□□□□ -2.22
TPM4P67936 snoU13.26-201ENST00000459452 105 ntBASIC1.18□□□□□ -2.22
TPM4P67936 MTND1P3-201ENST00000484956 952 ntBASIC1.18□□□□□ -2.22
TPM4P67936 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM4P67936 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM4P67936 RAB11AP2-201ENST00000545905 639 ntBASIC1.18□□□□□ -2.22
TPM4P67936 MIR1273C-201ENST00000578669 77 ntBASIC1.18□□□□□ -2.22
TPM4P67936 AP000860.1-201ENST00000605250 559 ntBASIC1.18□□□□□ -2.22
TPM4P67936 AL590240.4-201ENST00000616908 390 ntBASIC1.18□□□□□ -2.22
TPM4P67936 MIR8063-201ENST00000621930 81 ntBASIC1.18□□□□□ -2.22
TPM4P67936 Y_RNA.33-201ENST00000362591 102 ntBASIC1.17□□□□□ -2.22
TPM4P67936 RNU5A-8P-201ENST00000364102 114 ntBASIC1.17□□□□□ -2.22
TPM4P67936 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TPM4P67936 AC009518.2-201ENST00000418056 731 ntBASIC1.17□□□□□ -2.22
TPM4P67936 CBX3P6-201ENST00000430257 527 ntBASIC1.17□□□□□ -2.22
TPM4P67936 UBE2V1P8-201ENST00000437166 265 ntBASIC1.17□□□□□ -2.22
TPM4P67936 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.17□□□□□ -2.22
TPM4P67936 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.17□□□□□ -2.22
TPM4P67936 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AC093852.1-201ENST00000503587 266 ntBASIC1.17□□□□□ -2.22
TPM4P67936 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.17□□□□□ -2.22
TPM4P67936 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TPM4P67936 AC008837.2-201ENST00000513076 418 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.17□□□□□ -2.22
TPM4P67936 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.17□□□□□ -2.22
TPM4P67936 AC137800.2-201ENST00000574375 120 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AC078795.2-201ENST00000602835 1252 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
TPM4P67936 AC022513.1-201ENST00000624512 117 ntBASIC1.17□□□□□ -2.22
TPM4P67936 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TPM4P67936 RNU6-621P-201ENST00000364752 109 ntBASIC1.16□□□□□ -2.22
TPM4P67936 MIR320C1-201ENST00000408566 88 ntBASIC1.16□□□□□ -2.22
TPM4P67936 RPL37P10-201ENST00000412884 288 ntBASIC1.16□□□□□ -2.22
TPM4P67936 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.16□□□□□ -2.22
TPM4P67936 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.16□□□□□ -2.22
TPM4P67936 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM4P67936 AL669831.1-202ENST00000428504 417 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM4P67936 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.16□□□□□ -2.22
TPM4P67936 AC108059.3-201ENST00000456388 214 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC130509.1-201ENST00000464158 433 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.16□□□□□ -2.22
TPM4P67936 HMGN1P13-201ENST00000505795 138 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC113347.3-201ENST00000509113 148 ntBASIC1.16□□□□□ -2.22
TPM4P67936 MTCO3P27-201ENST00000514397 196 ntBASIC1.16□□□□□ -2.22
TPM4P67936 RNU6-914P-201ENST00000516749 109 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM4P67936 AC092574.1-201ENST00000609771 420 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AL365204.3-201ENST00000612448 685 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM4P67936 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AL158163.2-201ENST00000619110 700 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC123767.1-202ENST00000620407 817 ntBASIC1.16□□□□□ -2.22
TPM4P67936 AC068205.3-201ENST00000636385 468 ntBASIC1.16□□□□□ -2.22
TPM4P67936 snoU2_19.1-201ENST00000362361 80 ntBASIC1.15□□□□□ -2.23
TPM4P67936 RNU6-212P-201ENST00000362642 104 ntBASIC1.15□□□□□ -2.23
TPM4P67936 RNU6-457P-201ENST00000363999 107 ntBASIC1.15□□□□□ -2.23
TPM4P67936 SNORD114-6-201ENST00000364393 72 ntBASIC1.15□□□□□ -2.23
TPM4P67936 RNU6-224P-201ENST00000384055 107 ntBASIC1.15□□□□□ -2.23
TPM4P67936 U8.10-201ENST00000384260 133 ntBASIC1.15□□□□□ -2.23
TPM4P67936 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.15□□□□□ -2.23
TPM4P67936 RN7SKP266-201ENST00000410232 287 ntBASIC1.15□□□□□ -2.23
TPM4P67936 Y_RNA.597-201ENST00000410463 100 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AL365338.1-201ENST00000422282 858 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AL591212.2-201ENST00000433923 257 ntBASIC1.15□□□□□ -2.23
TPM4P67936 GDI2P2-201ENST00000445131 608 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AC079140.2-201ENST00000506193 142 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AC090115.3-201ENST00000553218 849 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.15□□□□□ -2.23
TPM4P67936 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.15□□□□□ -2.23
TPM4P67936 AL355802.3-201ENST00000607571 545 ntBASIC1.15□□□□□ -2.23
TPM4P67936 AC018926.1-201ENST00000616335 435 ntBASIC1.15□□□□□ -2.23
TPM4P67936 RNU1-17P-201ENST00000363022 152 ntBASIC1.14□□□□□ -2.23
TPM4P67936 RNU6-395P-201ENST00000365662 106 ntBASIC1.14□□□□□ -2.23
TPM4P67936 SNORA75B-201ENST00000384053 137 ntBASIC1.14□□□□□ -2.23
TPM4P67936 RNA5SP390-201ENST00000410191 113 ntBASIC1.14□□□□□ -2.23
TPM4P67936 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.14□□□□□ -2.23
TPM4P67936 AL589872.1-201ENST00000426602 288 ntBASIC1.14□□□□□ -2.23
TPM4P67936 USP9YP11-201ENST00000427537 717 ntBASIC1.14□□□□□ -2.23
TPM4P67936 RPS15AP10-201ENST00000432472 382 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms