Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC107952.2-201ENST00000606048 486 ntBASIC0.91□□□□□ -2.26
NUP98P52948 AC008759.3-201ENST00000613300 508 ntBASIC0.91□□□□□ -2.26
NUP98P52948 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.91□□□□□ -2.26
NUP98P52948 CDR1-202ENST00000625883 1485 ntBASIC0.91□□□□□ -2.26
NUP98P52948 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
NUP98P52948 RNU6-1105P-201ENST00000384774 107 ntBASIC0.9□□□□□ -2.27
NUP98P52948 RNU6-278P-201ENST00000390945 109 ntBASIC0.9□□□□□ -2.27
NUP98P52948 RNA5SP501-201ENST00000410990 112 ntBASIC0.9□□□□□ -2.27
NUP98P52948 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP98P52948 AL355994.1-201ENST00000424379 260 ntBASIC0.9□□□□□ -2.27
NUP98P52948 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP98P52948 AL596276.1-201ENST00000434465 418 ntBASIC0.9□□□□□ -2.27
NUP98P52948 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP98P52948 AL583843.1-201ENST00000456070 346 ntBASIC0.9□□□□□ -2.27
NUP98P52948 RNU6-775P-201ENST00000459318 96 ntBASIC0.9□□□□□ -2.27
NUP98P52948 AC079140.2-201ENST00000506193 142 ntBASIC0.9□□□□□ -2.27
NUP98P52948 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
NUP98P52948 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
NUP98P52948 OR6C7P-201ENST00000547875 934 ntBASIC0.9□□□□□ -2.27
NUP98P52948 CR383656.8-201ENST00000549046 145 ntBASIC0.9□□□□□ -2.27
NUP98P52948 SNRPGP1-201ENST00000553864 222 ntBASIC0.9□□□□□ -2.27
NUP98P52948 VN1R83P-201ENST00000595685 445 ntBASIC0.9□□□□□ -2.27
NUP98P52948 AC098614.4-201ENST00000607601 462 ntBASIC0.9□□□□□ -2.27
NUP98P52948 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NUP98P52948 RNU6-611P-201ENST00000384276 104 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.89□□□□□ -2.27
NUP98P52948 CST2P1-201ENST00000425770 87 ntBASIC0.89□□□□□ -2.27
NUP98P52948 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.89□□□□□ -2.27
NUP98P52948 CBX3P6-201ENST00000430257 527 ntBASIC0.89□□□□□ -2.27
NUP98P52948 COX7BP2-201ENST00000437976 242 ntBASIC0.89□□□□□ -2.27
NUP98P52948 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP98P52948 FABP5P15-201ENST00000453566 214 ntBASIC0.89□□□□□ -2.27
NUP98P52948 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC010409.1-201ENST00000487382 476 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC026414.1-201ENST00000504046 698 ntBASIC0.89□□□□□ -2.27
NUP98P52948 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
NUP98P52948 BNIP3P9-201ENST00000603714 553 ntBASIC0.89□□□□□ -2.27
NUP98P52948 TUG1_2.1-201ENST00000614234 87 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AL132822.1-201ENST00000617063 513 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC123767.1-202ENST00000620407 817 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AL121890.5-201ENST00000620848 304 ntBASIC0.89□□□□□ -2.27
NUP98P52948 MTND4P21-201ENST00000453886 1357 ntBASIC0.89□□□□□ -2.27
NUP98P52948 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
NUP98P52948 AC092125.1-201ENST00000562568 1995 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AL353621.1-201ENST00000418219 243 ntBASIC0.89□□□□□ -2.27
NUP98P52948 MTCO1P3-201ENST00000429327 192 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP98P52948 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP98P52948 AC108729.1-201ENST00000487812 947 ntBASIC0.89□□□□□ -2.27
NUP98P52948 RPS23P4-201ENST00000487908 423 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC114981.1-201ENST00000503897 678 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC103851.1-201ENST00000506833 274 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP98P52948 AC005786.1-201ENST00000588553 154 ntBASIC0.89□□□□□ -2.27
NUP98P52948 AL355802.3-201ENST00000607571 545 ntBASIC0.89□□□□□ -2.27
NUP98P52948 U6.99-201ENST00000637524 83 ntBASIC0.89□□□□□ -2.27
NUP98P52948 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.88□□□□□ -2.27
NUP98P52948 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
NUP98P52948 RNU6-858P-201ENST00000362436 107 ntBASIC0.88□□□□□ -2.27
NUP98P52948 RNU5B-1-201ENST00000363286 116 ntBASIC0.88□□□□□ -2.27
NUP98P52948 SNORD114-23-201ENST00000363536 72 ntBASIC0.88□□□□□ -2.27
NUP98P52948 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
NUP98P52948 AC119751.3-201ENST00000399720 670 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AC008267.5-201ENST00000424928 265 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.88□□□□□ -2.27
NUP98P52948 AC005534.2-201ENST00000431047 433 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.88□□□□□ -2.27
NUP98P52948 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
NUP98P52948 SNORA31.17-201ENST00000516953 127 ntBASIC0.88□□□□□ -2.27
NUP98P52948 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.88□□□□□ -2.27
NUP98P52948 AC022784.5-201ENST00000522241 437 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP98P52948 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.88□□□□□ -2.27
NUP98P52948 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
NUP98P52948 AP003476.1-201ENST00000623984 516 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AC090517.3-201ENST00000625170 141 ntBASIC0.88□□□□□ -2.27
NUP98P52948 AC008993.2-201ENST00000631744 806 ntBASIC0.88□□□□□ -2.27
NUP98P52948 MIR26B-201ENST00000362251 77 ntBASIC0.87□□□□□ -2.27
NUP98P52948 RNU6-160P-201ENST00000384591 107 ntBASIC0.87□□□□□ -2.27
NUP98P52948 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 RNU6-333P-201ENST00000459117 107 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.87□□□□□ -2.27
NUP98P52948 AC021146.2-201ENST00000504736 556 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.87□□□□□ -2.27
NUP98P52948 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 RNU6-583P-201ENST00000516012 92 ntBASIC0.87□□□□□ -2.27
NUP98P52948 DEFB131D-201ENST00000526803 184 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 AC093249.1-201ENST00000567049 203 ntBASIC0.87□□□□□ -2.27
NUP98P52948 CLIC4P2-201ENST00000601934 717 ntBASIC0.87□□□□□ -2.27
NUP98P52948 MIR6134-201ENST00000617606 109 ntBASIC0.87□□□□□ -2.27
NUP98P52948 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC097460.3-201ENST00000623099 442 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms