Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TM4SF4P48230 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
TM4SF4P48230 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF4P48230 RNU6-859P-201ENST00000362728 107 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 Y_RNA.86-201ENST00000363020 111 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 RNU6-522P-201ENST00000364497 107 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 SNORA32.2-201ENST00000384049 122 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 RNU6-214P-201ENST00000384130 107 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AL096701.2-201ENST00000416920 238 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.34□□□□□ -1.87
TM4SF4P48230 AC018710.1-201ENST00000506509 158 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AC009163.5-201ENST00000575421 637 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AC005261.5-201ENST00000596280 355 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AL670379.10-201ENST00000604330 253 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 APOOP1-201ENST00000604695 592 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 AL670379.9-201ENST00000605428 253 ntBASIC3.34□□□□□ -1.87
TM4SF4P48230 CASC19-280ENST00000642102 1351 ntBASIC3.34□□□□□ -1.88
TM4SF4P48230 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
TM4SF4P48230 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.34□□□□□ -1.88
TM4SF4P48230 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU6-527P-201ENST00000363425 104 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU1-112P-201ENST00000364401 164 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU6-1013P-201ENST00000384180 107 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 SNORD116-20-201ENST00000384529 92 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 FTH1P15-201ENST00000406984 280 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU6-1245P-201ENST00000411130 106 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF4P48230 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AL513185.2-201ENST00000425543 193 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC093151.1-201ENST00000427711 313 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RPS12P18-201ENST00000442381 270 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 MED28P2-201ENST00000475771 317 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC069439.1-201ENST00000494739 167 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.33□□□□□ -1.88
TM4SF4P48230 RNU6-377P-201ENST00000515965 102 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF4P48230 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF4P48230 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF4P48230 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
TM4SF4P48230 MIR6817-201ENST00000615588 66 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC090617.10-201ENST00000624308 134 ntBASIC3.33□□□□□ -1.88
TM4SF4P48230 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
TM4SF4P48230 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF4P48230 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF4P48230 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF4P48230 Y_RNA.72-201ENST00000362894 103 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 RNU6-78P-201ENST00000362897 107 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF4P48230 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF4P48230 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF4P48230 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF4P48230 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF4P48230 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF4P48230 AL591043.1-201ENST00000432461 424 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC009296.1-201ENST00000443146 155 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF4P48230 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 SMURF2P1-201ENST00000514992 481 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 RNU6-1069P-201ENST00000516612 133 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 BTF3P12-201ENST00000519620 469 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF4P48230 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF4P48230 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF4P48230 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC018638.8-201ENST00000588755 281 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC011712.1-201ENST00000588959 234 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 BNIP3P25-201ENST00000596023 559 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC096772.1-201ENST00000609146 564 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF4P48230 AC090617.7-201ENST00000623952 126 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 AC073476.4-201ENST00000628409 72 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 MTND5P30-201ENST00000452896 1731 ntBASIC3.32□□□□□ -1.88
TM4SF4P48230 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF4P48230 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF4P48230 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF4P48230 ZNF658B-202ENST00000615961 3375 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 U8.2-201ENST00000363156 134 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RNA5SP322-201ENST00000363617 119 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 Y_RNA.160-201ENST00000363677 92 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RNU1-89P-201ENST00000384592 164 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 MIR450B-201ENST00000401182 78 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RPS15AP10-201ENST00000432472 382 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 MTND4LP16-201ENST00000440828 295 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RPL7P12-201ENST00000446719 750 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 AC117503.1-201ENST00000472241 394 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF4P48230 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.31□□□□□ -1.88
TM4SF4P48230 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF4P48230 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF4P48230 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 RNU6-1314P-201ENST00000517139 104 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TM4SF4P48230 AC025423.5-201ENST00000550230 219 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms