Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.48□□□□□ -2.01
NEDD4P46934 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 AL512360.1-201ENST00000555346 234 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC021739.1-201ENST00000559631 174 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 HMGB1P33-201ENST00000563485 527 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC025678.1-201ENST00000567861 338 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC068792.1-201ENST00000621354 417 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NEDD4P46934 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD4P46934 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD4P46934 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 Y_RNA.516-201ENST00000384541 124 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 MIR578-201ENST00000384828 96 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 RNU2-2P-201ENST00000410396 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.47□□□□□ -2.01
NEDD4P46934 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.47□□□□□ -2.01
NEDD4P46934 AL627311.1-201ENST00000431514 115 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 GTF2IP20-201ENST00000431663 360 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 RPL7P54-201ENST00000438336 674 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 RPL23AP58-201ENST00000440453 469 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AC016691.1-201ENST00000441321 413 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 FDX1P2-201ENST00000450769 375 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 SNRPFP3-201ENST00000457792 225 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 RPS29P12-201ENST00000460178 152 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.47□□□□□ -2.01
NEDD4P46934 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.47□□□□□ -2.01
NEDD4P46934 AC079140.5-201ENST00000507882 310 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AC112206.3-201ENST00000514578 389 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.47□□□□□ -2.01
NEDD4P46934 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.47□□□□□ -2.01
NEDD4P46934 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.47□□□□□ -2.01
NEDD4P46934 DEFB131E-202ENST00000602581 683 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AC080078.2-201ENST00000603766 501 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.47□□□□□ -2.01
NEDD4P46934 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.47□□□□□ -2.01
NEDD4P46934 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
NEDD4P46934 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.01
NEDD4P46934 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD4P46934 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD4P46934 RNU6-552P-201ENST00000362869 119 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 Y_RNA.372-201ENST00000365599 102 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RNU6-166P-201ENST00000384371 107 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RNU6-1179P-201ENST00000384667 107 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RNU6-750P-201ENST00000390946 107 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD4P46934 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD4P46934 Y_RNA.623-201ENST00000411128 95 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RPL21P90-201ENST00000415692 466 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.46□□□□□ -2.02
NEDD4P46934 AL358075.3-201ENST00000426289 226 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD4P46934 WASF1P1-201ENST00000447560 1131 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RPL23AP7-203ENST00000449021 469 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AIG1P1-201ENST00000503376 148 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 RAC1P5-201ENST00000512182 576 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.46□□□□□ -2.02
NEDD4P46934 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 SNORD19.2-201ENST00000516978 73 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.46□□□□□ -2.02
NEDD4P46934 AL137161.1-201ENST00000532231 390 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.46□□□□□ -2.02
NEDD4P46934 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.46□□□□□ -2.02
NEDD4P46934 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.46□□□□□ -2.02
NEDD4P46934 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.46□□□□□ -2.02
NEDD4P46934 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.46□□□□□ -2.02
NEDD4P46934 MIR4648-201ENST00000580107 72 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 MIR3941-201ENST00000582572 103 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.46□□□□□ -2.02
NEDD4P46934 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.46□□□□□ -2.02
NEDD4P46934 AC087045.1-201ENST00000605856 382 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AF250324.2-201ENST00000608299 610 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 AC092954.2-201ENST00000609103 430 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 MIR6134-201ENST00000617606 109 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 FO624990.1-201ENST00000636373 85 ntBASIC2.46□□□□□ -2.02
NEDD4P46934 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.46□□□□□ -2.02
NEDD4P46934 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 RNU6-434P-201ENST00000384376 107 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 RNU6-45P-201ENST00000384471 107 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 AL590002.1-201ENST00000406554 418 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 RNU6-193P-201ENST00000410977 107 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NEDD4P46934 AL353621.1-201ENST00000418219 243 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms