Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU6-898P-201ENST00000365627 104 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
CDH3P22223 MIR514A2-201ENST00000385131 88 ntBASIC2.6□□□□□ -1.99
CDH3P22223 MIR514A3-201ENST00000385132 88 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RNU6-607P-201ENST00000411283 108 ntBASIC2.6□□□□□ -1.99
CDH3P22223 CYCSP33-201ENST00000414485 327 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 AL627311.1-201ENST00000431514 115 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH3P22223 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AC128713.1-201ENST00000471495 306 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AC011005.2-201ENST00000487324 359 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH3P22223 LRRC34P2-201ENST00000514850 553 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 MTND1P35-201ENST00000526739 508 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AL118558.2-201ENST00000556294 238 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH3P22223 AC060766.3-201ENST00000591442 263 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
CDH3P22223 AL645944.1-201ENST00000603857 493 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RMST_4.1-201ENST00000616886 107 ntBASIC2.6□□□□□ -1.99
CDH3P22223 MIR6134-201ENST00000617606 109 ntBASIC2.6□□□□□ -1.99
CDH3P22223 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
CDH3P22223 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH3P22223 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH3P22223 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH3P22223 Y_RNA.89-201ENST00000363031 102 ntBASIC2.59□□□□□ -1.99
CDH3P22223 RNU6-534P-201ENST00000364877 106 ntBASIC2.59□□□□□ -1.99
CDH3P22223 SNORD37.1-201ENST00000390968 65 ntBASIC2.59□□□□□ -1.99
CDH3P22223 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
CDH3P22223 BTF3P7-201ENST00000407097 488 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH3P22223 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH3P22223 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH3P22223 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.59□□□□□ -1.99
CDH3P22223 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH3P22223 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
CDH3P22223 MTND3P16-201ENST00000452205 344 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC092989.1-201ENST00000481235 277 ntBASIC2.59□□□□□ -1.99
CDH3P22223 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH3P22223 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
CDH3P22223 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.59□□□□□ -1.99
CDH3P22223 MTND4P7-201ENST00000523876 130 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC006199.1-201ENST00000548728 219 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC234778.2-201ENST00000566241 354 ntBASIC2.59□□□□□ -1.99
CDH3P22223 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH3P22223 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AL449363.1-201ENST00000617815 186 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC026585.1-201ENST00000619582 524 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC022418.1-201ENST00000624118 445 ntBASIC2.59□□□□□ -1.99
CDH3P22223 AC092608.2-201ENST00000624427 218 ntBASIC2.59□□□□□ -1.99
CDH3P22223 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH3P22223 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDH3P22223 CDC27P3-201ENST00000635418 1910 ntBASIC2.59□□□□□ -1.99
CDH3P22223 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.58□□□□□ -2
CDH3P22223 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
CDH3P22223 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CDH3P22223 Y_RNA.399-201ENST00000383955 105 ntBASIC2.58□□□□□ -2
CDH3P22223 RNU6-434P-201ENST00000384376 107 ntBASIC2.58□□□□□ -2
CDH3P22223 MIR10A-201ENST00000385043 110 ntBASIC2.58□□□□□ -2
CDH3P22223 MIR34A-201ENST00000385130 110 ntBASIC2.58□□□□□ -2
CDH3P22223 OR9R1P-201ENST00000412200 877 ntBASIC2.58□□□□□ -2
CDH3P22223 AC016831.2-201ENST00000417179 352 ntBASIC2.58□□□□□ -2
CDH3P22223 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
CDH3P22223 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.58□□□□□ -2
CDH3P22223 PRPS1P1-201ENST00000445305 876 ntBASIC2.58□□□□□ -2
CDH3P22223 MTCO3P38-201ENST00000468910 766 ntBASIC2.58□□□□□ -2
CDH3P22223 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.58□□□□□ -2
CDH3P22223 RPS29P25-201ENST00000481709 171 ntBASIC2.58□□□□□ -2
CDH3P22223 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
CDH3P22223 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.58□□□□□ -2
CDH3P22223 HMGB1P30-201ENST00000492455 606 ntBASIC2.58□□□□□ -2
CDH3P22223 RPL38P4-201ENST00000502376 214 ntBASIC2.58□□□□□ -2
CDH3P22223 AC074344.1-201ENST00000512823 224 ntBASIC2.58□□□□□ -2
CDH3P22223 MIR892C-201ENST00000516410 77 ntBASIC2.58□□□□□ -2
CDH3P22223 RNU6-1038P-201ENST00000516516 104 ntBASIC2.58□□□□□ -2
CDH3P22223 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
CDH3P22223 SNORD60.2-201ENST00000516883 86 ntBASIC2.58□□□□□ -2
CDH3P22223 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
CDH3P22223 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.58□□□□□ -2
CDH3P22223 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
CDH3P22223 AC092325.1-201ENST00000566449 554 ntBASIC2.58□□□□□ -2
CDH3P22223 AC025281.1-201ENST00000567026 265 ntBASIC2.58□□□□□ -2
CDH3P22223 MIR3162-201ENST00000581818 82 ntBASIC2.58□□□□□ -2
CDH3P22223 AC010525.2-201ENST00000590920 195 ntBASIC2.58□□□□□ -2
CDH3P22223 AC005261.5-201ENST00000596280 355 ntBASIC2.58□□□□□ -2
CDH3P22223 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH3P22223 RMST_3.1-201ENST00000611651 109 ntBASIC2.58□□□□□ -2
CDH3P22223 AC007014.2-201ENST00000615581 479 ntBASIC2.58□□□□□ -2
CDH3P22223 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.58□□□□□ -2
CDH3P22223 AL031601.2-202ENST00000622650 282 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms