Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC245166.1-201ENST00000521012 253 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC025423.5-201ENST00000550230 219 ntBASIC3.04□□□□□ -1.92
MMP3P08254 LRRC37A5P-203ENST00000580181 585 ntBASIC3.04□□□□□ -1.92
MMP3P08254 MIR3672-201ENST00000584290 82 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.04□□□□□ -1.92
MMP3P08254 C8orf59P2-201ENST00000603441 271 ntBASIC3.04□□□□□ -1.92
MMP3P08254 NUTF2P8-201ENST00000604593 363 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC123912.5-201ENST00000605470 343 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC004832.5-201ENST00000608677 401 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC090115.4-201ENST00000609970 188 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC002076.2-201ENST00000617362 122 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC092608.2-201ENST00000624427 218 ntBASIC3.04□□□□□ -1.92
MMP3P08254 U6.99-201ENST00000637524 83 ntBASIC3.04□□□□□ -1.92
MMP3P08254 CUL1P1-201ENST00000509510 2425 ntBASIC3.04□□□□□ -1.92
MMP3P08254 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MMP3P08254 AC090740.1-201ENST00000623193 2262 ntBASIC3.04□□□□□ -1.92
MMP3P08254 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MMP3P08254 MTND5P27-201ENST00000428871 1720 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MMP3P08254 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNU4-73P-201ENST00000363164 141 ntBASIC3.03□□□□□ -1.92
MMP3P08254 SNORD113-7-201ENST00000363762 77 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
MMP3P08254 XGY1-201ENST00000381172 446 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNU6-658P-201ENST00000384606 106 ntBASIC3.03□□□□□ -1.92
MMP3P08254 MIR10A-201ENST00000385043 110 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNA5SP293-201ENST00000410527 113 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNU6-607P-201ENST00000411283 108 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.03□□□□□ -1.92
MMP3P08254 SKA2P1-201ENST00000425592 390 ntBASIC3.03□□□□□ -1.92
MMP3P08254 HMGB1P18-201ENST00000438801 619 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RPS27P29-201ENST00000463110 252 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC090525.1-201ENST00000479116 478 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RPL30P14-201ENST00000482744 348 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.03□□□□□ -1.92
MMP3P08254 MIR892C-201ENST00000516410 77 ntBASIC3.03□□□□□ -1.92
MMP3P08254 Y_RNA.682-201ENST00000516457 100 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNU6-1069P-201ENST00000516612 133 ntBASIC3.03□□□□□ -1.92
MMP3P08254 RNU6-256P-201ENST00000516747 97 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.03□□□□□ -1.92
MMP3P08254 AL132765.2-201ENST00000610812 351 ntBASIC3.03□□□□□ -1.92
MMP3P08254 MIR6817-201ENST00000615588 66 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC068831.7-201ENST00000616954 363 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC022140.2-201ENST00000623500 188 ntBASIC3.03□□□□□ -1.92
MMP3P08254 AC099654.5-201ENST00000636479 350 ntBASIC3.03□□□□□ -1.92
MMP3P08254 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.03□□□□□ -1.93
MMP3P08254 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
MMP3P08254 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
MMP3P08254 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
MMP3P08254 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MMP3P08254 SNORD14B-201ENST00000364533 90 ntBASIC3.02□□□□□ -1.93
MMP3P08254 Y_RNA.301-201ENST00000364990 103 ntBASIC3.02□□□□□ -1.93
MMP3P08254 RNU6-166P-201ENST00000384371 107 ntBASIC3.02□□□□□ -1.93
MMP3P08254 RNU6-1035P-201ENST00000384477 107 ntBASIC3.02□□□□□ -1.93
MMP3P08254 SNORD73A-201ENST00000386062 65 ntBASIC3.02□□□□□ -1.93
MMP3P08254 SNORA40C-201ENST00000391285 128 ntBASIC3.02□□□□□ -1.93
MMP3P08254 VN1R36P-201ENST00000414936 291 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.02□□□□□ -1.93
MMP3P08254 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
MMP3P08254 MTND4LP16-201ENST00000440828 295 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AL513328.1-201ENST00000446460 224 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AC092798.1-201ENST00000458542 409 ntBASIC3.02□□□□□ -1.93
MMP3P08254 RN7SL75P-201ENST00000461926 281 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
MMP3P08254 MTND3P22-201ENST00000510932 243 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AC096725.1-201ENST00000514266 313 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AP000889.2-201ENST00000532684 490 ntBASIC3.02□□□□□ -1.93
MMP3P08254 MIR3941-201ENST00000582572 103 ntBASIC3.02□□□□□ -1.93
MMP3P08254 RNU6-85P-201ENST00000605989 107 ntBASIC3.02□□□□□ -1.93
MMP3P08254 uc_338.15-201ENST00000615470 191 ntBASIC3.02□□□□□ -1.93
MMP3P08254 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
MMP3P08254 AL359697.1-201ENST00000624879 587 ntBASIC3.02□□□□□ -1.93
MMP3P08254 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.02□□□□□ -1.93
MMP3P08254 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
MMP3P08254 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
MMP3P08254 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MMP3P08254 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MMP3P08254 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
MMP3P08254 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MMP3P08254 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.58-201ENST00000362807 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.61-201ENST00000362835 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.154-201ENST00000363624 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 RNY3P1-201ENST00000365085 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.324-201ENST00000365165 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 RNY3-201ENST00000365484 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MMP3P08254 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.490-201ENST00000384413 102 ntBASIC3.01□□□□□ -1.93
MMP3P08254 MIR548F5-201ENST00000408421 86 ntBASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.623-201ENST00000411128 95 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AL590632.1-201ENST00000424289 371 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AL353729.1-201ENST00000425044 720 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AL590664.1-201ENST00000448065 339 ntBASIC3.01□□□□□ -1.93
MMP3P08254 snoU13.28-201ENST00000459235 104 ntBASIC3.01□□□□□ -1.93
MMP3P08254 snoU109.2-201ENST00000459316 135 ntBASIC3.01□□□□□ -1.93
MMP3P08254 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.01□□□□□ -1.93
MMP3P08254 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms