Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU1-73P-201ENST00000383971 164 ntBASIC2.57□□□□□ -2
VTNP04004 RNU6-45P-201ENST00000384471 107 ntBASIC2.57□□□□□ -2
VTNP04004 EEF1A1P40-201ENST00000412883 573 ntBASIC2.57□□□□□ -2
VTNP04004 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.57□□□□□ -2
VTNP04004 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.57□□□□□ -2
VTNP04004 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
VTNP04004 AL353705.4-201ENST00000449661 238 ntBASIC2.57□□□□□ -2
VTNP04004 MTND3P16-201ENST00000452205 344 ntBASIC2.57□□□□□ -2
VTNP04004 AL583843.1-201ENST00000456070 346 ntBASIC2.57□□□□□ -2
VTNP04004 RNU7-180P-201ENST00000459240 63 ntBASIC2.57□□□□□ -2
VTNP04004 RPL21P99-201ENST00000480369 423 ntBASIC2.57□□□□□ -2
VTNP04004 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.57□□□□□ -2
VTNP04004 RPS27AP10-201ENST00000496103 208 ntBASIC2.57□□□□□ -2
VTNP04004 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
VTNP04004 MTND3P25-201ENST00000509243 135 ntBASIC2.57□□□□□ -2
VTNP04004 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
VTNP04004 AL117351.2-201ENST00000513571 157 ntBASIC2.57□□□□□ -2
VTNP04004 AC112206.3-201ENST00000514578 389 ntBASIC2.57□□□□□ -2
VTNP04004 AC009902.1-201ENST00000519351 183 ntBASIC2.57□□□□□ -2
VTNP04004 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
VTNP04004 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.57□□□□□ -2
VTNP04004 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.57□□□□□ -2
VTNP04004 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.57□□□□□ -2
VTNP04004 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.57□□□□□ -2
VTNP04004 AC005498.1-201ENST00000592125 465 ntBASIC2.57□□□□□ -2
VTNP04004 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.57□□□□□ -2
VTNP04004 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
VTNP04004 AC068944.2-201ENST00000610373 403 ntBASIC2.57□□□□□ -2
VTNP04004 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VTNP04004 MIR6715A-201ENST00000615929 79 ntBASIC2.57□□□□□ -2
VTNP04004 UCA1.1-201ENST00000620952 75 ntBASIC2.57□□□□□ -2
VTNP04004 MIR3662-201ENST00000637030 95 ntBASIC2.57□□□□□ -2
VTNP04004 AC024614.3-201ENST00000637860 256 ntBASIC2.57□□□□□ -2
VTNP04004 AC138915.1-201ENST00000565427 1685 ntBASIC2.57□□□□□ -2
VTNP04004 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
VTNP04004 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
VTNP04004 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VTNP04004 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
VTNP04004 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VTNP04004 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VTNP04004 SNORD3E-201ENST00000362899 217 ntBASIC2.56□□□□□ -2
VTNP04004 RNU6-778P-201ENST00000363269 103 ntBASIC2.56□□□□□ -2
VTNP04004 RNY3P3-201ENST00000363816 102 ntBASIC2.56□□□□□ -2
VTNP04004 SNORA75B-201ENST00000384053 137 ntBASIC2.56□□□□□ -2
VTNP04004 RNU6-1127P-201ENST00000384580 107 ntBASIC2.56□□□□□ -2
VTNP04004 AC023141.4-201ENST00000412031 328 ntBASIC2.56□□□□□ -2
VTNP04004 AL135786.1-201ENST00000415892 214 ntBASIC2.56□□□□□ -2
VTNP04004 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.56□□□□□ -2
VTNP04004 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.56□□□□□ -2
VTNP04004 MRPS10P2-201ENST00000431226 381 ntBASIC2.56□□□□□ -2
VTNP04004 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
VTNP04004 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.56□□□□□ -2
VTNP04004 AC010095.1-201ENST00000443543 144 ntBASIC2.56□□□□□ -2
VTNP04004 RPS15AP27-201ENST00000449183 343 ntBASIC2.56□□□□□ -2
VTNP04004 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
VTNP04004 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.56□□□□□ -2
VTNP04004 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.56□□□□□ -2
VTNP04004 AC104136.1-201ENST00000512969 394 ntBASIC2.56□□□□□ -2
VTNP04004 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.56□□□□□ -2
VTNP04004 AC022634.1-201ENST00000520765 532 ntBASIC2.56□□□□□ -2
VTNP04004 MIR4782-201ENST00000577987 79 ntBASIC2.56□□□□□ -2
VTNP04004 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
VTNP04004 OR4G1P-203ENST00000641984 1631 ntBASIC2.56□□□□□ -2
VTNP04004 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
VTNP04004 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
VTNP04004 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
VTNP04004 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VTNP04004 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
VTNP04004 RNU6-434P-201ENST00000384376 107 ntBASIC2.55□□□□□ -2
VTNP04004 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.55□□□□□ -2
VTNP04004 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
VTNP04004 AL358075.3-201ENST00000426289 226 ntBASIC2.55□□□□□ -2
VTNP04004 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
VTNP04004 RPS15AP5-201ENST00000436276 388 ntBASIC2.55□□□□□ -2
VTNP04004 PRPS1P1-201ENST00000445305 876 ntBASIC2.55□□□□□ -2
VTNP04004 Z96811.1-201ENST00000445880 108 ntBASIC2.55□□□□□ -2
VTNP04004 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.55□□□□□ -2
VTNP04004 AL360271.2-201ENST00000447710 161 ntBASIC2.55□□□□□ -2
VTNP04004 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.55□□□□□ -2
VTNP04004 MTCO3P38-201ENST00000468910 766 ntBASIC2.55□□□□□ -2
VTNP04004 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.55□□□□□ -2
VTNP04004 LRRC34P2-201ENST00000514850 553 ntBASIC2.55□□□□□ -2
VTNP04004 SNORD60.2-201ENST00000516883 86 ntBASIC2.55□□□□□ -2
VTNP04004 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.55□□□□□ -2
VTNP04004 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.55□□□□□ -2
VTNP04004 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.55□□□□□ -2
VTNP04004 AC025281.1-201ENST00000567026 265 ntBASIC2.55□□□□□ -2
VTNP04004 AC009163.5-201ENST00000575421 637 ntBASIC2.55□□□□□ -2
VTNP04004 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
VTNP04004 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.55□□□□□ -2
VTNP04004 AC073539.2-201ENST00000597113 165 ntBASIC2.55□□□□□ -2
VTNP04004 AL355877.2-201ENST00000603670 358 ntBASIC2.55□□□□□ -2
VTNP04004 AL355598.1-201ENST00000604169 202 ntBASIC2.55□□□□□ -2
VTNP04004 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
VTNP04004 AC104458.1-201ENST00000608243 463 ntBASIC2.55□□□□□ -2
VTNP04004 AC004520.1-201ENST00000608362 1413 ntBASIC2.55□□□□□ -2
VTNP04004 AC002553.4-201ENST00000616896 331 ntBASIC2.55□□□□□ -2
VTNP04004 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
VTNP04004 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VTNP04004 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms