Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PRPS1P1-201ENST00000445305 876 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 MTND5P20-201ENST00000448677 143 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 NIPA2P5-201ENST00000452282 464 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 MTATP6P7-201ENST00000453315 681 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN1O95832 RPL12P25-201ENST00000455592 494 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 PMCHL2-203ENST00000457791 237 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AC007547.1-201ENST00000462177 490 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RN7SL20P-201ENST00000488827 297 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 SNORA14.1-201ENST00000516113 141 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RNU6-1038P-201ENST00000516516 104 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 SNORA25.17-201ENST00000517184 124 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 BTF3P12-201ENST00000519620 469 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.51□□□□□ -2.01
CLDN1O95832 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN1O95832 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN1O95832 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN1O95832 AC092747.3-201ENST00000603769 301 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AL355598.1-201ENST00000604169 202 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AC025754.2-201ENST00000606491 432 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AL627309.6-201ENST00000606857 840 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN1O95832 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 AC100810.6-201ENST00000638068 285 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN1O95832 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN1O95832 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN1O95832 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN1O95832 CBX3P1-201ENST00000325243 554 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-799P-201ENST00000363567 107 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-384P-201ENST00000364900 104 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 SNORA9.2-201ENST00000365361 133 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 Y_RNA.480-201ENST00000384364 102 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-166P-201ENST00000384371 107 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNA5SP252-201ENST00000391131 119 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 EIF4E2P1-201ENST00000393781 255 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 ATG3P1-201ENST00000419507 911 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AC099548.1-201ENST00000421443 426 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AC098614.3-201ENST00000438957 440 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AP004217.1-201ENST00000480579 346 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 HMGB1P30-201ENST00000492455 606 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 HMGN1P12-201ENST00000499125 195 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN1O95832 AC079140.5-201ENST00000507882 310 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 MTND3P25-201ENST00000509243 135 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN1O95832 AC025465.4-201ENST00000513422 638 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AC046134.1-201ENST00000514454 666 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-991P-201ENST00000516168 107 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-1069P-201ENST00000516612 133 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 Y_RNA.702-201ENST00000516843 96 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-928P-201ENST00000516876 104 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 RNU6-56P-201ENST00000516986 93 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 SNORA31.19-201ENST00000517079 126 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AC025755.1-201ENST00000521306 278 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN1O95832 AL391261.3-201ENST00000557194 520 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN1O95832 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN1O95832 LARP7P1-201ENST00000605576 316 ntBASIC2.5□□□□□ -2.01
CLDN1O95832 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CLDN1O95832 AL161431.1-201ENST00000618966 4205 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLDN1O95832 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN1O95832 RNU6-1303P-201ENST00000364841 107 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 RNU6-867P-201ENST00000364956 107 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 RNA5SP219-201ENST00000390940 113 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 Y_RNA.623-201ENST00000411128 95 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AC022028.1-201ENST00000412054 408 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN1O95832 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN1O95832 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN1O95832 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.49□□□□□ -2.01
CLDN1O95832 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN1O95832 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN1O95832 AL714022.1-201ENST00000439897 151 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN1O95832 AC087884.1-201ENST00000469738 328 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN1O95832 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN1O95832 AC107953.1-201ENST00000522216 297 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 CYCSP27-201ENST00000527643 293 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AC087241.2-201ENST00000535801 324 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN1O95832 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN1O95832 AC005730.3-201ENST00000583067 366 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 CTHRC1P1-201ENST00000605383 469 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 Z82243.1-201ENST00000609432 473 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN1O95832 FAM157A-202ENST00000615155 405 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms