Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL359697.1-201ENST00000624879 587 ntBASIC2.65□□□□□ -1.99
PRKNO60260 U2.21-201ENST00000637295 81 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKNO60260 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
PRKNO60260 AC096644.4-201ENST00000563417 2912 ntBASIC2.65□□□□□ -1.99
PRKNO60260 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKNO60260 RNU1-35P-201ENST00000362782 153 ntBASIC2.64□□□□□ -1.99
PRKNO60260 Y_RNA.212-201ENST00000364177 102 ntBASIC2.64□□□□□ -1.99
PRKNO60260 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKNO60260 DYNLT3P1-201ENST00000378574 347 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RNU1-73P-201ENST00000383971 164 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RNU6-851P-201ENST00000384565 107 ntBASIC2.64□□□□□ -1.99
PRKNO60260 MIR888-201ENST00000401186 77 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RNA5SP38-201ENST00000410750 119 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.64□□□□□ -1.99
PRKNO60260 MTND4P28-201ENST00000426217 387 ntBASIC2.64□□□□□ -1.99
PRKNO60260 TOMM20P4-201ENST00000427861 435 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
PRKNO60260 UBE2V1P7-201ENST00000446395 340 ntBASIC2.64□□□□□ -1.99
PRKNO60260 NDUFB1P2-201ENST00000449477 176 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RNU7-138P-201ENST00000459479 64 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC079140.5-201ENST00000507882 310 ntBASIC2.64□□□□□ -1.99
PRKNO60260 FGF7P4-201ENST00000509595 295 ntBASIC2.64□□□□□ -1.99
PRKNO60260 RNU6-566P-201ENST00000516790 107 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC087854.1-201ENST00000519706 414 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKNO60260 AP000867.2-201ENST00000532468 320 ntBASIC2.64□□□□□ -1.99
PRKNO60260 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.64□□□□□ -1.99
PRKNO60260 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKNO60260 AC093027.1-201ENST00000546698 429 ntBASIC2.64□□□□□ -1.99
PRKNO60260 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.64□□□□□ -1.99
PRKNO60260 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC138761.3-201ENST00000579993 334 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKNO60260 MIR4719-201ENST00000585233 84 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AL355598.1-201ENST00000604169 202 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC123912.5-201ENST00000605470 343 ntBASIC2.64□□□□□ -1.99
PRKNO60260 MIR7106-201ENST00000612419 65 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AL138726.1-201ENST00000614873 333 ntBASIC2.64□□□□□ -1.99
PRKNO60260 AC009233.1-201ENST00000616477 371 ntBASIC2.64□□□□□ -1.99
PRKNO60260 MIR1302-1-201ENST00000637932 143 ntBASIC2.64□□□□□ -1.99
PRKNO60260 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKNO60260 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKNO60260 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKNO60260 FAM35CP-201ENST00000554755 2470 ntBASIC2.63□□□□□ -1.99
PRKNO60260 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-37P-201ENST00000362692 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-778P-201ENST00000363269 103 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-11P-201ENST00000364234 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-7-201ENST00000364784 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-8-201ENST00000365467 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-25P-201ENST00000383873 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-1-201ENST00000383898 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-48P-201ENST00000384161 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-36P-201ENST00000384172 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-4P-201ENST00000384205 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-5P-201ENST00000384238 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-3P-201ENST00000384314 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-16P-201ENST00000384385 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-15P-201ENST00000384534 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-2-201ENST00000384627 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-29P-201ENST00000384637 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-9-201ENST00000384776 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-33P-201ENST00000384793 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 SNORD73A-201ENST00000386062 65 ntBASIC2.63□□□□□ -1.99
PRKNO60260 MIR548F5-201ENST00000408421 86 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RPL26P27-201ENST00000414397 437 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKNO60260 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKNO60260 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.63□□□□□ -1.99
PRKNO60260 AL359672.1-201ENST00000442302 409 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RPL32P28-201ENST00000443577 397 ntBASIC2.63□□□□□ -1.99
PRKNO60260 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKNO60260 AC233279.1-201ENST00000455300 423 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RPL26P9-201ENST00000457466 433 ntBASIC2.63□□□□□ -1.99
PRKNO60260 snoU109.2-201ENST00000459316 135 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AC008526.1-201ENST00000509149 338 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.63□□□□□ -1.99
PRKNO60260 Y_RNA.691-201ENST00000516611 103 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RN7SKP282-201ENST00000516824 299 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-703P-201ENST00000516946 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-1183P-201ENST00000517054 60 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNA5SP454-201ENST00000517231 127 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKNO60260 COPS8P3-201ENST00000526024 482 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AP005597.4-201ENST00000526762 229 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKNO60260 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.63□□□□□ -1.99
PRKNO60260 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKNO60260 AL355375.2-201ENST00000574825 175 ntBASIC2.63□□□□□ -1.99
PRKNO60260 MIR4790-201ENST00000577799 79 ntBASIC2.63□□□□□ -1.99
PRKNO60260 MIR4795-201ENST00000584182 89 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AC023043.2-201ENST00000589678 1026 ntBASIC2.63□□□□□ -1.99
PRKNO60260 AL645944.1-201ENST00000603857 493 ntBASIC2.63□□□□□ -1.99
PRKNO60260 RNU6-6P-201ENST00000606623 107 ntBASIC2.63□□□□□ -1.99
PRKNO60260 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.63□□□□□ -1.99
PRKNO60260 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKNO60260 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PRKNO60260 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms