Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.73□□□□□ -2.13
CHMP2AO43633 Y_RNA.689-201ENST00000516589 107 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.73□□□□□ -2.13
CHMP2AO43633 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.73□□□□□ -2.13
CHMP2AO43633 AC091489.2-201ENST00000566263 604 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CHMP2AO43633 AL353778.1-201ENST00000603149 408 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 SEPT7P9-203ENST00000604116 343 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 AC018638.7-201ENST00000605836 1114 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 MIR15A-201ENST00000607334 83 ntBASIC1.73□□□□□ -2.13
CHMP2AO43633 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.73□□□□□ -2.13
CHMP2AO43633 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CHMP2AO43633 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHMP2AO43633 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHMP2AO43633 TEX21P-201ENST00000447107 1476 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNU6-858P-201ENST00000362436 107 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNU6-60P-201ENST00000364792 103 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNU6-166P-201ENST00000384371 107 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 SNORA67.6-201ENST00000391093 99 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RPL22P18-201ENST00000417197 377 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RPS27AP14-201ENST00000422868 454 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 CALM2P2-201ENST00000428512 440 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AL365184.2-201ENST00000431139 435 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.72□□□□□ -2.13
CHMP2AO43633 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.72□□□□□ -2.13
CHMP2AO43633 Z73417.1-201ENST00000447373 778 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AMD1P1-201ENST00000457220 922 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RN7SKP210-201ENST00000459176 261 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 snoU109.2-201ENST00000459316 135 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNA5SP337-201ENST00000517007 109 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNU6-201P-201ENST00000517100 61 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 RNU6-586P-201ENST00000517265 104 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AP003122.4-201ENST00000530980 758 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.72□□□□□ -2.13
CHMP2AO43633 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.72□□□□□ -2.13
CHMP2AO43633 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.72□□□□□ -2.13
CHMP2AO43633 RPS3AP4-201ENST00000555161 764 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AC093249.1-201ENST00000567049 203 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 BNIP3P25-201ENST00000596023 559 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 VN1R80P-201ENST00000597126 338 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 DEFB131E-202ENST00000602581 683 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 SNRPGP17-201ENST00000603780 214 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 AC027807.2-201ENST00000616099 408 ntBASIC1.72□□□□□ -2.13
CHMP2AO43633 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
CHMP2AO43633 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 MIR1283-2-201ENST00000408621 87 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 RNU6-174P-201ENST00000410406 106 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 RNU6-1025P-201ENST00000410629 104 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AC138623.1-201ENST00000418060 216 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.71□□□□□ -2.14
CHMP2AO43633 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.71□□□□□ -2.14
CHMP2AO43633 AL008629.1-201ENST00000438615 184 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AL590365.1-201ENST00000450788 243 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.71□□□□□ -2.14
CHMP2AO43633 AC109927.2-201ENST00000506416 303 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP2AO43633 RNU6-1092P-201ENST00000516955 87 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP2AO43633 MTCYBP33-201ENST00000575007 1130 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AC103987.3-201ENST00000582071 292 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 MIR548AB-201ENST00000584917 84 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP2AO43633 AC008751.2-201ENST00000597885 980 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP2AO43633 AC126118.1-201ENST00000607744 628 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 RNU6-91P-201ENST00000607774 107 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AC093788.1-201ENST00000609356 927 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AP000240.1-201ENST00000609910 452 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 AL365204.3-201ENST00000612448 685 ntBASIC1.71□□□□□ -2.14
CHMP2AO43633 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CHMP2AO43633 RNU5E-1-201ENST00000362477 120 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 SNORD114-19-201ENST00000363072 75 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CHMP2AO43633 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CHMP2AO43633 SNORA40C-201ENST00000391285 128 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 RPS20P15-201ENST00000412792 311 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.7□□□□□ -2.14
CHMP2AO43633 AL078601.1-201ENST00000444542 271 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 AL583843.1-201ENST00000456070 346 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CHMP2AO43633 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.7□□□□□ -2.14
CHMP2AO43633 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.7□□□□□ -2.14
CHMP2AO43633 SNORA31.23-201ENST00000517219 133 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.7□□□□□ -2.14
CHMP2AO43633 AP005660.1-201ENST00000522972 293 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 HMGN1P30-201ENST00000589286 268 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 CLIC4P2-201ENST00000601934 717 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 AC112187.2-201ENST00000604345 283 ntBASIC1.7□□□□□ -2.14
CHMP2AO43633 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHMP2AO43633 RNU4-28P-201ENST00000364739 141 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 RNU6-817P-201ENST00000391083 104 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 MIR1262-201ENST00000408276 93 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AL031779.1-201ENST00000415663 330 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 PGBD4P6-201ENST00000421501 610 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms