Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Gm11539-201ENSMUST00000119837 557 ntBASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.55■□□□□ 0.4
Vstm4T1NXB5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vstm4T1NXB5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vstm4T1NXB5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Gm18421-201ENSMUST00000204122 625 ntBASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vstm4T1NXB5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.52■□□□□ 0.4
Vstm4T1NXB5 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vstm4T1NXB5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vstm4T1NXB5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Gm715-201ENSMUST00000117865 831 ntBASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Gm10653-202ENSMUST00000139570 835 ntBASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.51■□□□□ 0.39
Vstm4T1NXB5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms