Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.56□□□□□ -0.08
H2afb3S4R1G7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Gm27011-201ENSMUST00000182352 972 ntBASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H2afb3S4R1G7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Gm7370-201ENSMUST00000219471 767 ntBASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb3S4R1G7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
H2afb3S4R1G7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms