Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Gm44492-201ENSMUST00000197012 141 ntBASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac6Q9Z2V5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Gm13597-201ENSMUST00000121239 375 ntBASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac6Q9Z2V5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hdac6Q9Z2V5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Gm9682-201ENSMUST00000197505 556 ntBASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac6Q9Z2V5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac6Q9Z2V5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hdac6Q9Z2V5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Hdac6Q9Z2V5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac6Q9Z2V5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac6Q9Z2V5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms