Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lgr5Q9Z1P4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lgr5Q9Z1P4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lgr5Q9Z1P4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.27■□□□□ 0.68
Lgr5Q9Z1P4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lgr5Q9Z1P4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lgr5Q9Z1P4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Lgr5Q9Z1P4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Lgr5Q9Z1P4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Mir8117-201ENSMUST00000184773 107 ntBASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgr5Q9Z1P4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gm37153-201ENSMUST00000193637 231 ntBASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.25■□□□□ 0.67
Lgr5Q9Z1P4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm15358-201ENSMUST00000119249 520 ntBASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm13597-201ENSMUST00000121239 375 ntBASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm17968-201ENSMUST00000194902 784 ntBASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgr5Q9Z1P4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgr5Q9Z1P4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms