Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm27525-201ENSMUST00000184465 107 ntBASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h3Q9Z0Y9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h3Q9Z0Y9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h3Q9Z0Y9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms