Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcb1Q9Z0H3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Gm11780-201ENSMUST00000136880 516 ntBASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
Smarcb1Q9Z0H3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcb1Q9Z0H3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcb1Q9Z0H3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Mir5131-201ENSMUST00000175426 93 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcb1Q9Z0H3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.69■□□□□ 0.26
Smarcb1Q9Z0H3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms