Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Gm6659-201ENSMUST00000174752 547 ntBASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClcnkaQ9WUB7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm23634-201ENSMUST00000175071 91 ntBASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClcnkaQ9WUB7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Gm5587-201ENSMUST00000206270 674 ntBASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms