Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn8aQ9WTU3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Gm12350-201ENSMUST00000121208 462 ntBASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scn8aQ9WTU3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn8aQ9WTU3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn8aQ9WTU3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms