Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gm3344-201ENSMUST00000169610 603 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gm44872-201ENSMUST00000207864 420 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 CT009495.1-201ENSMUST00000224221 862 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 AC154252.1-201ENSMUST00000226041 473 ntBASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx6Q9R1R0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Gm2594-201ENSMUST00000214774 742 ntBASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lhx6Q9R1R0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lhx6Q9R1R0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.21■□□□□ 0.02
Lhx6Q9R1R0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lhx6Q9R1R0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Lhx6Q9R1R0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lhx6Q9R1R0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm37073-201ENSMUST00000192469 1222 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44357-201ENSMUST00000195897 142 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm19658-201ENSMUST00000196231 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44367-201ENSMUST00000196836 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44350-201ENSMUST00000197197 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44390-201ENSMUST00000197533 144 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44313-201ENSMUST00000198018 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44486-201ENSMUST00000198508 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44454-201ENSMUST00000198541 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44314-201ENSMUST00000199263 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44394-201ENSMUST00000199558 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44484-201ENSMUST00000199873 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44466-201ENSMUST00000200264 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 Gm44359-201ENSMUST00000200671 138 ntBASIC15.2■□□□□ 0.02
Lhx6Q9R1R0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms