Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Gm6089-201ENSMUST00000197666 938 ntBASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col13a1Q9R1N9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Gm8097-201ENSMUST00000117903 829 ntBASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col13a1Q9R1N9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gm27000-201ENSMUST00000182943 842 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms