Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn11aQ9R053 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn11aQ9R053 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn11aQ9R053 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.04■□□□□ 0.64
Scn11aQ9R053 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scn11aQ9R053 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.03■□□□□ 0.64
Scn11aQ9R053 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Mir6956-201ENSMUST00000183598 62 ntBASIC19.03■□□□□ 0.64
Scn11aQ9R053 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.03■□□□□ 0.64
Scn11aQ9R053 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Scn11aQ9R053 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scn11aQ9R053 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn11aQ9R053 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.02■□□□□ 0.63
Scn11aQ9R053 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn11aQ9R053 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn11aQ9R053 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn11aQ9R053 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Gm14701-201ENSMUST00000117156 348 ntBASIC19.01■□□□□ 0.63
Scn11aQ9R053 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.01■□□□□ 0.63
Scn11aQ9R053 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.01■□□□□ 0.63
Scn11aQ9R053 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn11aQ9R053 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19■□□□□ 0.63
Scn11aQ9R053 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19■□□□□ 0.63
Scn11aQ9R053 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms