Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh5Q9QUM7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Msh5Q9QUM7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms