Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4bQ9ES00 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ube4bQ9ES00 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4bQ9ES00 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Gm11927-201ENSMUST00000118472 759 ntBASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 App-207ENSMUST00000227737 2827 ntBASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4bQ9ES00 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Gm13401-201ENSMUST00000117074 291 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms