Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Gm21362-201ENSMUST00000194272 928 ntBASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a3bpQ9EQG9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Gm33142-201ENSMUST00000193913 867 ntBASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Gm7367-201ENSMUST00000057611 492 ntBASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a3bpQ9EQG9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a3bpQ9EQG9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.52■□□□□ 0.56
Col4a3bpQ9EQG9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a3bpQ9EQG9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms